PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID GBG83869.1
Organism
Chara braunii
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Charophyceae; Charales; Characeae; Chara
Family Trihelix
Protein Properties Length: 263aa    MW: 29237.5 Da    PI: 8.8037
Description Trihelix family protein
Gene Model
Gene Model ID Type Source Coding Sequence
GBG83869.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1trihelix28.92.9e-09129201267
    trihelix   2 WtkqevlaLiearremeerlr.......rgklkkplWeevskkmrergferspkqCkekwenlnkrykkikeg 67 
                 Wt +e ++L++ +re + ++        r + k+ +W++++k+++  g  +    C  kwenl + ykki + 
  GBG83869.1 129 WTIEEQMLLVRCKREQDMHMAglghnhgRMRTKEWKWKDIAKRLAVLGTVKDVDDCFRKWENLFQNYKKIFRF 201
                 **************88888775444433568**************************************8655 PP
Sequence ? help Back to Top
Protein Sequence    Length: 263 aa     Download sequence    
MGVVRSGGGR VEVSSAQRGS THPDVRDDNG CVPGVSERAV VDNITRGVSN MRAHSDGVGD  60
DAAYRNDDDD DETEEINVGD GKHNVDIRPL GKRAGRGRGR TRGGGRGQSN GRAGRGGASE  120
DGSKSATYWT IEEQMLLVRC KREQDMHMAG LGHNHGRMRT KEWKWKDIAK RLAVLGTVKD  180
VDDCFRKWEN LFQNYKKIFR FQGKSGGMDF FRLTNEEKKE ENFKFRMDKA LYTEIHASMV  240
GNYTIFPPNV ADIGSPEGVQ LPT
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G35640.19e-07Trihelix family protein