PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID GBG83955.1
Organism
Chara braunii
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Charophyceae; Charales; Characeae; Chara
Family Trihelix
Protein Properties Length: 598aa    MW: 65212 Da    PI: 6.5084
Description Trihelix family protein
Gene Model
Gene Model ID Type Source Coding Sequence
GBG83955.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1trihelix25.53.4e-08382440253
    trihelix   2 WtkqevlaLiearremeerlrrg.......klkkplWeevskkmrergferspkqCkek 53 
                 W  +e l+L++ +r+ e+ + ++       k k ++W++++k+m ++g++r  +qC ++
  GBG83955.1 382 WNLNESLVLVRCKRDQEDYFANAghnfarmKTKDQKWADIAKRMDKEGVRRDGEQCMKR 440
                 999***********77777765322233338*************************875 PP
Sequence ? help Back to Top
Protein Sequence    Length: 598 aa     Download sequence    
MSMAPIGRGT VVPSVISSAP LYCCPLSCSK AASSVPCTYR DEHMADMLRK TTLIIFLVGA  60
LLLVIILHLW QVVGTFNRVG RRRGSKKLRQ AASVKTGMGD GYGRGAEGYG IGRGGYAVGG  120
GAEQSVHHRF DPNLYSHLPP HQQPLPYDIT WAPPSSTLDL AWGSTQTSYD TPARVDERRG  180
GLGPMSTLLA DMREGRSLPV DLQLSPSTTM DVSRTVVIND NGQGCGSTSQ TMQDAGFDDG  240
ISHLRSNRVP TSVASEPQPV PTPVHRPSST APYVQAGSCD VSTGGGSPRC VERIICRFNN  300
MRATSDDDGA RQGGAATETE PVDVDVGDDD DEYDDGEEVV VKEATAGRKK QQASKGRGKG  360
KSTGKDGGTN GDGGDSGGRA NWNLNESLVL VRCKRDQEDY FANAGHNFAR MKTKDQKWAD  420
IAKRMDKEGV RRDGEQCMKR ELRHRTCVGV RTRATMDIQV ALRGRVLGRT TTCYEMRHRR  480
GEDDDSVYNF VKPTTIREVR QYEVDADGET VLYASLCLGF EDDLLCEAVG HVAKVSRAIP  540
NRWDGGVDVL ADIIDLLICN LADEYGDHMT DHPDFRVHPD PPLHDRPGLR GDIRKFDD