PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID GBG83982.1
Organism
Chara braunii
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Charophyceae; Charales; Characeae; Chara
Family GATA
Protein Properties Length: 413aa    MW: 42289.6 Da    PI: 7.0886
Description GATA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
GBG83982.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GATA44.22.7e-14367399133
        GATA   1 CsnCgttkTplWRrgpdgnktLCnaCGlyyrkk 33 
                 CsnC t  Tp WR+++ g   LCnaCGlyy+k+
  GBG83982.1 367 CSNCSTNATPFWRKDKHGGGPLCNACGLYYAKN 399
                 ****************99999*********996 PP
Sequence ? help Back to Top
Protein Sequence    Length: 413 aa     Download sequence    
MATEAAIYSS SPESTLWQAG RGAGGRGEVA TCSTDEIGRT PTIVRPRNRG AGSLASPGKC  60
LPHLRIHSDG EGYSGGSLTS PHSESTFPYD QSRPSSPPPS DSTDCDTCPE RDAADSSNAT  120
VVPGRDDGPT LAHSSGGPEV GLDGDPVASN AAALYTQQQL AWWWYNAMWQ AASAFYSMNP  180
AALAATCPYP QILHHHASWW MSQQHQHQQL KDGPASVGGM MMPLFYQHLA QQAGLMAAAA  240
AAAAGPRGES GSGSDAVAGV GALGERGGER GGERGGGGGG GGGGGGGCGA GRACADVVHT  300
GLGPASAAGN DRALLCNESI NDKKRPFAAA DDDGAGMGGR GGGNWIPSSP VPNGVRKRPR  360
PGETKICSNC STNATPFWRK DKHGGGPLCN ACGLYYAKND APRPRILWRK GDV
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1357361KRPRP
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G26930.15e-07GATA family protein