PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

GBG84115.1

Organism

Chara braunii

Taxonomic ID

69332

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Charophyceae; Charales; Characeae; Chara

Family

Trihelix

Protein Properties

Length: 1031aa MW: 111887 Da PI: 6.2547

Description

Trihelix family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
GBG84115.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	trihelix	30.3	1.1e-09	289	365	2	70
trihelix 2 WtkqevlaLiearremeerlr.......rgklkkplWeevskkmrergf.erspkqCkekwenlnkrykkikegekk 70 Wt ++ aLi+a+r+ +++l r k k +W++v k++ + g+ +r+ + C++kw+nl +k + + +++ GBG84115.1 289 WTVEHMIALIRAKRDQDSHLAglahttgRMKTKTWKWDDVEKRLVQMGVtSRKVVDCRKKWDNLYLHFKTVHKFMGE 365 ************888888855554335689999*****99999799***************99876665 PP

Sequence ? help Back to Top
Protein Sequence Length: 1031 aa Download sequence
MADLYRRLPL LVLAVVLLLA IVVFHICCLV RVLGRKQTRR TSKTARKMER VQTRTTLSVG 60 AAGSSRQRCR SAEAVRRSYD PALYSHLPSH EISLPPSDDD GDDPRSGYDP GLVDLSFGLR 120 SGSADEVTRT VIVNPASGTT HTPAPVTTRT GGSVPCRTTT AGGTVDGRCP NEEWSATEVV 180 GRKFWDDHRR QSREASTAGI TRGVAKITVG ADDILGDEDG ADGEDCEADY GAGNDDEEDD 240 EEMEIRPVRR KRGGSRAAKK LPETRTGRRG KKGVEDASAG EGSKSRDFWT VEHMIALIRA 300 KRDQDSHLAG LAHTTGRMKT KTWKWDDVEK RLVQMGVTSR KVVDCRKKWD NLYLHFKTVH 360 KFMGESGKPN FFTLSPGERK ERGFDFRMDE RVYSEMAAMT RSDHTIHPTN LADTGATGGV 420 QMPGPRGGRN ESGGSEGGGD GQDDDQGSTR DSISGGGVGG GSKWKNVRQQ TFDTIAYVMK 480 EHGSLMATTV DSASKRQCSI LTRQCDILER EVEVQKEHYV KADRANLMIF RFAEQMPPRG 540 ASARGRKDAG VGDGGETNKG RGQIPKSKRQ RIDDASSSQT DDFLADEVAM VDAQGTTGVA 600 RLGFGRDGVS REQLQEVKRS VVGGAAGTVP RTPNMAGVVV TSARVAGQLL AAAGQGQPCQ 660 PLPLQHVLAP GGGHTAPAQK GDATVSASRT AAADHTAKGG VVEGAGRGGV DDIGRDDDRR 720 DGKWEGNDDD DRPLVPRGKG ASKEDELEEK AKLWVDCDAF WGQGPGKPLR EAVGECTDYF 780 VAIANGDAGA EPPSMLIMPP NDVPRFKIDD PVQQSYITVD LTTDLARAVW QGLEWSRVVS 840 PALVYHMLAM KMDVPLWFAG VRIEDRPEDD DMAARQEATV LLLAECWTDV LWCGQWADGG 900 CVKQERLSRL ADSLQALLCM VMWIMHMGGD DDRSHYEAWL YASMVAKPTM IAAGSYIFNW 960 RRHMVDSANL VLDRLGKAHL TLGDYPQCIP EWCDCGLAFG HNAALKNAAE AAKHGWIGSG 1020 PAADDDGDDG K

Sequence ? help Back to Top

Protein Sequence Length: 1031 aa Download sequence

MADLYRRLPL LVLAVVLLLA IVVFHICCLV RVLGRKQTRR TSKTARKMER VQTRTTLSVG  60
AAGSSRQRCR SAEAVRRSYD PALYSHLPSH EISLPPSDDD GDDPRSGYDP GLVDLSFGLR  120
SGSADEVTRT VIVNPASGTT HTPAPVTTRT GGSVPCRTTT AGGTVDGRCP NEEWSATEVV  180
GRKFWDDHRR QSREASTAGI TRGVAKITVG ADDILGDEDG ADGEDCEADY GAGNDDEEDD  240
EEMEIRPVRR KRGGSRAAKK LPETRTGRRG KKGVEDASAG EGSKSRDFWT VEHMIALIRA  300
KRDQDSHLAG LAHTTGRMKT KTWKWDDVEK RLVQMGVTSR KVVDCRKKWD NLYLHFKTVH  360
KFMGESGKPN FFTLSPGERK ERGFDFRMDE RVYSEMAAMT RSDHTIHPTN LADTGATGGV  420
QMPGPRGGRN ESGGSEGGGD GQDDDQGSTR DSISGGGVGG GSKWKNVRQQ TFDTIAYVMK  480
EHGSLMATTV DSASKRQCSI LTRQCDILER EVEVQKEHYV KADRANLMIF RFAEQMPPRG  540
ASARGRKDAG VGDGGETNKG RGQIPKSKRQ RIDDASSSQT DDFLADEVAM VDAQGTTGVA  600
RLGFGRDGVS REQLQEVKRS VVGGAAGTVP RTPNMAGVVV TSARVAGQLL AAAGQGQPCQ  660
PLPLQHVLAP GGGHTAPAQK GDATVSASRT AAADHTAKGG VVEGAGRGGV DDIGRDDDRR  720
DGKWEGNDDD DRPLVPRGKG ASKEDELEEK AKLWVDCDAF WGQGPGKPLR EAVGECTDYF  780
VAIANGDAGA EPPSMLIMPP NDVPRFKIDD PVQQSYITVD LTTDLARAVW QGLEWSRVVS  840
PALVYHMLAM KMDVPLWFAG VRIEDRPEDD DMAARQEATV LLLAECWTDV LWCGQWADGG  900
CVKQERLSRL ADSLQALLCM VMWIMHMGGD DDRSHYEAWL YASMVAKPTM IAAGSYIFNW  960
RRHMVDSANL VLDRLGKAHL TLGDYPQCIP EWCDCGLAFG HNAALKNAAE AAKHGWIGSG  1020
PAADDDGDDG K

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	566	571	KSKRQR