PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

GBG84148.1

Organism

Chara braunii

Taxonomic ID

69332

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Charophyceae; Charales; Characeae; Chara

Family

Trihelix

Protein Properties

Length: 695aa MW: 71442.9 Da PI: 5.3891

Description

Trihelix family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
GBG84148.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	trihelix	39.5	1.5e-12	317	400	1	73
trihelix 1 rWtkqevlaLiearremeerlrrgk...........lkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkrts 73 rW ++e++aLi++ e + +++ k W+ v++ mr+ g+er +C+ +w+nl++ ++++ ++e + + GBG84148.1 317 RWGDDETMALIRLLGEHRASGGADGdihlepagvrrTTKSTWKMVAQSMRAAGYERPWCKCQTRWKNLRGWFRRVLKNEARSSR 400 8************99999998744555666666699***********************************999998432 PP

Sequence ? help Back to Top
Protein Sequence Length: 695 aa Download sequence
MRRSGDDSAD VRGGHGERPS AAKSTPPPAP NPGHSQGGGG PRSTPTANDP TAQGTSAYLI 60 NSGGGGEALE VLRTQLRMRA MCLDRQTPRT GLPSTIPPPS SSSPALLNDA QAGGGIRLSS 120 AATADAQDVQ SDLRSDNEAE DELTRVKFSG QDQLQVRTKP GGDPNVASAS PPLGGEGQSS 180 DAPGSQQTAT LAHEDSGEAE GDGLRRLCSL QCTEGLQSGG TCDEEETGMS GGEGEHTSAP 240 MSRVCTRGGP RDVKETASRD GGGNEGGGPQ VGKQVCDGRD GGGGGGREGE GEGEGEGEDG 300 GVGGRESARP QGRQRDRWGD DETMALIRLL GEHRASGGAD GDIHLEPAGV RRTTKSTWKM 360 VAQSMRAAGY ERPWCKCQTR WKNLRGWFRR VLKNEARSSR LSYWKMAPSQ RIEAGLGFDL 420 RRHWFDLIDV YLRGNNPASH PVNLGLDPAA EIRDDVSTGG GGGGEGGDGG GGGGGGDGMA 480 ADRRRXGGGG GSGXADQXGX XGXGGGGGGA AREASSGPAS PDASGGSGFD PAHPAGGDRD 540 RDRDHRDCVS PVSDDDDDGS PAGDGGGGGG GGAGGPGGDL STHVTSTSSR KRPRANGDSR 600 EEAMKEIAHV MREQTAALRE LAKEQCRVQR QCVELSCQAM RAHTEMQRES LSLLASKMEA 660 GYKAVASALA NLAGGAGSNT SRKRRCRGIQ SQEEE

Sequence ? help Back to Top

Protein Sequence Length: 695 aa Download sequence

MRRSGDDSAD VRGGHGERPS AAKSTPPPAP NPGHSQGGGG PRSTPTANDP TAQGTSAYLI  60
NSGGGGEALE VLRTQLRMRA MCLDRQTPRT GLPSTIPPPS SSSPALLNDA QAGGGIRLSS  120
AATADAQDVQ SDLRSDNEAE DELTRVKFSG QDQLQVRTKP GGDPNVASAS PPLGGEGQSS  180
DAPGSQQTAT LAHEDSGEAE GDGLRRLCSL QCTEGLQSGG TCDEEETGMS GGEGEHTSAP  240
MSRVCTRGGP RDVKETASRD GGGNEGGGPQ VGKQVCDGRD GGGGGGREGE GEGEGEGEDG  300
GVGGRESARP QGRQRDRWGD DETMALIRLL GEHRASGGAD GDIHLEPAGV RRTTKSTWKM  360
VAQSMRAAGY ERPWCKCQTR WKNLRGWFRR VLKNEARSSR LSYWKMAPSQ RIEAGLGFDL  420
RRHWFDLIDV YLRGNNPASH PVNLGLDPAA EIRDDVSTGG GGGGEGGDGG GGGGGGDGMA  480
ADRRRXGGGG GSGXADQXGX XGXGGGGGGA AREASSGPAS PDASGGSGFD PAHPAGGDRD  540
RDRDHRDCVS PVSDDDDDGS PAGDGGGGGG GGAGGPGGDL STHVTSTSSR KRPRANGDSR  600
EEAMKEIAHV MREQTAALRE LAKEQCRVQR QCVELSCQAM RAHTEMQRES LSLLASKMEA  660
GYKAVASALA NLAGGAGSNT SRKRRCRGIQ SQEEE

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G33550.1	6e-07	Trihelix family protein