PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID GBG84292.1
Organism
Chara braunii
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Charophyceae; Charales; Characeae; Chara
Family Trihelix
Protein Properties Length: 524aa    MW: 58043.5 Da    PI: 7.5363
Description Trihelix family protein
Gene Model
Gene Model ID Type Source Coding Sequence
GBG84292.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1trihelix28.54e-09258334270
    trihelix   2 WtkqevlaLiearr.......emeerlrrgklkkplWeevskkm.rergferspkqCkekwenlnkrykkikegekk 70 
                 W  +  l+L + +r       + ++++ r k k  +W +++k+m +++g +r  + C ++wen+ + ykk  ++ek+
  GBG84292.1 258 WGLDDSLVLARCKRdlddymaSQGSNFARMKTKTWKWNDIAKRMcQQGGTNRDGNSCMKRWENIFGWYKKNWDREKD 334
                 6666666666777722222223344455668999*********989999*********************9999987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 524 aa     Download sequence    
MHHRFDPALY AHLPPYMQPL PDDDEWVPPP STLPLAWGST HTSFDSGGRA DERGTGTGPM  60
SSLLVGARRG EPDPLQLHLS PMCTMDASRT VLVKHSTQSQ GGVSVTTQDA REDEPHRQRP  120
PRSSSASTRS HSRPSTFSTP VRSWVPHTRP PGKVTMATAA ESPQVIERII ARYSRMCTDV  180
EADDGGDTSG QGEESEDVAE ECMDDDDERE EDDNGGVKEV TSKSGKKKAS KNHGRSKVRE  240
GGGFADGNGG GGSTRQNWGL DDSLVLARCK RDLDDYMASQ GSNFARMKTK TWKWNDIAKR  300
MCQQGGTNRD GNSCMKRWEN IFGWYKKNWD REKDSGLQSF FLLTPKKRKE LGYKFAVDRQ  360
LYDAIHTTTP NNQAIHPPNL HDTDGLPPQQ PNEGYQSQAR GPTIVGETSA SDNMERKAGD  420
GYGSRSSQGK PAGKRRNARQ MAFDDVTDVM KTHSMVVVKS VDCASKRQCE VLQRRCDIME  480
REAWTQEKQC EVLDAGQRML CDALLKTASA LSRGLLQQPP LMKG