PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

GBG84444.1

Organism

Chara braunii

Taxonomic ID

69332

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Charophyceae; Charales; Characeae; Chara

Family

Trihelix

Protein Properties

Length: 752aa MW: 80841.1 Da PI: 5.653

Description

Trihelix family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
GBG84444.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	trihelix	41.5	3.4e-13	323	398	1	69
trihelix 1 rWtkqevlaLiearremeerlrrgk.......lkkplWeevskkmrergferspkqCkekwenlnkrykkikegek 69 rW + + L ++r+e+++ l++ lk + W++v ++m+ +gf+r++ qCk+k++ l +y+++k++e+ GBG84444.1 323 RWGETXTEWLCRFRNEVKSLLGEXTeplgrarLKLGXWKDVEQRMKGKGFNRNADQCKNKFNTLLDYYRRLKAHEG 398 79999999999999988888886422333333*****************************************997 PP

Sequence ? help Back to Top
Protein Sequence Length: 752 aa Download sequence
MWKRMGYRKE KGTVYGLQIK KWNDRSRRVA GQEQQSLSLS GSQSQCPIGD TIGGAEGDVQ 60 RPHTSSAFLF GGPAWSGGPV RGPDNAHGCA VVTDVPVQSV VTSHXHFSSP VSPVGGFRIG 120 LSGEDEVALR QQLRMRAMAM SDGLCMXXBE RGMSGVMTSP ARHDGRGHGS PGPSTVSXVD 180 NETXGCRSST PPAAMSATRX ASFPLSPEXI PRDVSPQPXR ARSXXAEYVI NRIIXDNEXX 240 VPPVEWPTRT AVEGDAVADP TAAGXSPPPR VXFEGLNTPS PVAAPSTSQH TPCSVENSAG 300 TSTXRPCEGP PTRPPSREKN TDRWGETXTE WLCRFRNEVK SLLGEXTEPL GRARLKLGXW 360 KDVEQRMKGK GFNRNADQCK NKFNTLLDYY RRLKAHEGWS GLPSYWDMNA SRRKKYNVDF 420 VLRRAVYDIT HPVEKDKDSI NLTNLMDSGA DEERLEDSER CNDVDGETEG GSEDPAAGSG 480 SSPGLRTSRR GPHSTSFDPV LGKRRRTATN ARESSMQAIT GAMRDHTSAL TRSDRECVKM 540 RCEATRDIAR HQAELHRELM QQDIASRERI ATITGDWVEK GYLVLADAIR SLRGCTLPSA 600 ASAMSAAQVA VPPGGTVPSA ASAMPPAQVP VPGGGTVPSA ASGMLPAQVH VDDDSGSAGW 660 GSNAVAPDEL NGGWGVVVTH GPIGWAEIAA TYSHFESWSN PPTPNGYLMS PPTSDEDAGS 720 DNEDDNEAGS DGDDNDDKAG FDGHDEAGSS FL

Sequence ? help Back to Top

Protein Sequence Length: 752 aa Download sequence

MWKRMGYRKE KGTVYGLQIK KWNDRSRRVA GQEQQSLSLS GSQSQCPIGD TIGGAEGDVQ  60
RPHTSSAFLF GGPAWSGGPV RGPDNAHGCA VVTDVPVQSV VTSHXHFSSP VSPVGGFRIG  120
LSGEDEVALR QQLRMRAMAM SDGLCMXXBE RGMSGVMTSP ARHDGRGHGS PGPSTVSXVD  180
NETXGCRSST PPAAMSATRX ASFPLSPEXI PRDVSPQPXR ARSXXAEYVI NRIIXDNEXX  240
VPPVEWPTRT AVEGDAVADP TAAGXSPPPR VXFEGLNTPS PVAAPSTSQH TPCSVENSAG  300
TSTXRPCEGP PTRPPSREKN TDRWGETXTE WLCRFRNEVK SLLGEXTEPL GRARLKLGXW  360
KDVEQRMKGK GFNRNADQCK NKFNTLLDYY RRLKAHEGWS GLPSYWDMNA SRRKKYNVDF  420
VLRRAVYDIT HPVEKDKDSI NLTNLMDSGA DEERLEDSER CNDVDGETEG GSEDPAAGSG  480
SSPGLRTSRR GPHSTSFDPV LGKRRRTATN ARESSMQAIT GAMRDHTSAL TRSDRECVKM  540
RCEATRDIAR HQAELHRELM QQDIASRERI ATITGDWVEK GYLVLADAIR SLRGCTLPSA  600
ASAMSAAQVA VPPGGTVPSA ASAMPPAQVP VPGGGTVPSA ASGMLPAQVH VDDDSGSAGW  660
GSNAVAPDEL NGGWGVVVTH GPIGWAEIAA TYSHFESWSN PPTPNGYLMS PPTSDEDAGS  720
DNEDDNEAGS DGDDNDDKAG FDGHDEAGSS FL