PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID GBG84795.1
Organism
Chara braunii
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Charophyceae; Charales; Characeae; Chara
Family Trihelix
Protein Properties Length: 396aa    MW: 43084.6 Da    PI: 8.4288
Description Trihelix family protein
Gene Model
Gene Model ID Type Source Coding Sequence
GBG84795.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1trihelix25.63.2e-08285357469
    trihelix   4 kqevlaLiearremeerlrrgk.......lkkplWeevskkmrergferspkqCkekwenlnkrykkikegek 69 
                 ++e+ +L ++r+em+e ++++         k++ W+ v+++m+e+gf+   +qCk  + +  + y+++k +ek
  GBG84795.1 285 EDETTVLCRGRNEMKEVMGDDTeamgrvrEKAGFWKMVADRMWEKGFNCDEEQCKGMFHQALGFYRRLKIHEK 357
                 68999999999988888887533444444**************************************998776 PP
Sequence ? help Back to Top
Protein Sequence    Length: 396 aa     Download sequence    
MTLWHAGAEV ALLWTSVRCS ICLRAGLSRP SRALNFDVTQ PLLDAQEPAA RTGPAGSTID  60
FSPISGIRYG VGGQDENSLR MQLRIRAMAM AEGQSQDGIA HVAEHVRHVS LRHEDRRSLS  120
PTVPPVPSAN RGPIPLHLSN LGCSTAVDSP SGHPPTVQSV TPQCAAVNSE GVALHETHTP  180
ATDYILNRLV PAIEAGAVEG EGLSSLARGG VGTPPSSSHH HTSLIPVTPQ QPRCGQATTP  240
PAGHTASQAQ RSDGGEGGGL STEGTKERGK VWQVDAPKNT ERGREDETTV LCRGRNEMKE  300
VMGDDTEAMG RVREKAGFWK MVADRMWEKG FNCDEEQCKG MFHQALGFYR RLKIHEKWSP  360
KLLGHVTRSA RDTMWILFRG SRDMTPSTRW RRIPTQ