PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID GBG85058.1
Organism
Chara braunii
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Charophyceae; Charales; Characeae; Chara
Family Trihelix
Protein Properties Length: 295aa    MW: 32722.2 Da    PI: 8.0068
Description Trihelix family protein
Gene Model
Gene Model ID Type Source Coding Sequence
GBG85058.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1trihelix29.51.9e-0983159270
    trihelix   2 WtkqevlaLiearr.......emeerlrrgklkkplWeevskkmrergfer.spkqCkekwenlnkrykkikegekk 70 
                 Wt ++  aL++a+r        +++++++ k++  +W++v k++ + g++  ++++C+ekw+nl ++++ + + +++
  GBG85058.1  83 WTVDHMIALVRAKRdqdlhlvGLGHNYGQMKSRTWKWDDVEKRLVKAGVTTtKAEKCREKWDNLYQQFESVHRFMGQ 159
                 9*************77776666777777889*************999995549***************999887766 PP
Sequence ? help Back to Top
Protein Sequence    Length: 295 aa     Download sequence    
MNVGGHDMPV YGDGRGDKDC TADDGDNDNW DDDDGAMEIC PLGRKRRGTR ATNKSTEPRA  60
GRKGKKVVDD TSIGDRGKSR DFWTVDHMIA LVRAKRDQDL HLVGLGHNYG QMKSRTWKWD  120
DVEKRLVKAG VTTTKAEKCR EKWDNLYQQF ESVHRFMGQS GKQNFFTLTL TERKEKGFDF  180
RMDERVYSEM NVMSKADHTI HPTNLADTGT VGGVQMVGPG GGRNESVASD GCRNGQDDDQ  240
RSTRDSSFSN GSAGGGDKRK NAIQLTFNVI ADVMDKHGKL MATTVDSAAR GSVQF
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G35640.14e-06Trihelix family protein