PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID GBG85350.1
Organism
Chara braunii
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Charophyceae; Charales; Characeae; Chara
Family Trihelix
Protein Properties Length: 364aa    MW: 39865.2 Da    PI: 8.2097
Description Trihelix family protein
Gene Model
Gene Model ID Type Source Coding Sequence
GBG85350.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1trihelix25.82.8e-08243305258
    trihelix   2 WtkqevlaLiearremeerlrrg......klkkplWeevskkmrergferspkqCkekwenln 58 
                 Wt +e  aL ++  e +  + ++      k ++++ e+++++++++g++r+++ C++kw +l+
  GBG85350.1 243 WTLEEQIALARISVEENALMADAngvhkqKTRAKRYEWIANRLKDEGYNRTAEDCRKKWTKLK 305
                 77777777766666544444433122211799****************************997 PP
Sequence ? help Back to Top
Protein Sequence    Length: 364 aa     Download sequence    
MEGRRFTSEL MGEYDDAMDS DRSGVEDIAG TQMDRIGGVQ RGSARQWPRT PFSNEGFQPS  60
AQQWQYTSAP PSSRGGQAGG PRRSSPGGGI ENVVMADHTE RQLHVPANAC PQPQTMRAQV  120
QGSWTARLSQ GGFMHGQSSG WGGGFSSFGT AGTGERTAFA VEGWHGETIA MQFGDKAVAS  180
STPRSGGAAG NVTGKRTADD AVSEGSVMRP GVGPSTEGMA SGQRTQRPKR APRVEGGKKN  240
NPWTLEEQIA LARISVEENA LMADANGVHK QKTRAKRYEW IANRLKDEGY NRTAEDCRKK  300
WTKLKEIVSH IGDKCYMFGE AGYFNMTTEQ RMDKDVCTTF EEPLWDAMEW WRLKKAYTCD  360
TTLA