PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID GBG85397.1
Organism
Chara braunii
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Charophyceae; Charales; Characeae; Chara
Family Trihelix
Protein Properties Length: 260aa    MW: 28344 Da    PI: 8.461
Description Trihelix family protein
Gene Model
Gene Model ID Type Source Coding Sequence
GBG85397.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1trihelix285.6e-0936110270
    trihelix   2 WtkqevlaLiearremeerlrrgk......lkkplWeevskkmrergferspkqCkekwenlnkrykkikegekk 70 
                 Wt +e  +  ++  e++  + +++       k+ + ++++++m+e+g+ r+ + C++kw +l+k+ ++i++   +
  GBG85397.1  36 WTLEERVLVAKISGEDDALMADAEgahslmTKGRRYDWIADRMKEEGYGRTGEDCQKKWAELQKKVREIRDACDG 110
                 5555555555555555555555445555668999*******************************9999987655 PP
Sequence ? help Back to Top
Protein Sequence    Length: 260 aa     Download sequence    
MRRGRRGTGR PPKERGVGER QQGGKSTAAP KKNTLWTLEE RVLVAKISGE DDALMADAEG  60
AHSLMTKGRR YDWIADRMKE EGYGRTGEDC QKKWAELQKK VREIRDACDG SGKQPYWDLT  120
TEERKKLNIP MTFERPLWDA MEWYRMKAAF TMDNTMASED LRGMGSATAS EVGSEGGGTE  180
TSGGAPKIRR MNSGKVRGSD VGQGVLAMAA AMEDTSRTLC EGLDRAAGTL ASATTEGAAL  240
MAARLGDMAT EIDHVVGAMR