PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID GBG85400.1
Organism
Chara braunii
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Charophyceae; Charales; Characeae; Chara
Family Trihelix
Protein Properties Length: 383aa    MW: 42568.8 Da    PI: 10.5295
Description Trihelix family protein
Gene Model
Gene Model ID Type Source Coding Sequence
GBG85400.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1trihelix34.74.6e-111492011668
    trihelix  16 emeerlrrgklkkplWeevskkmrergferspkqCkekwenlnkrykkikege 68 
                  m+++++r k+++ +W +v+++++  g+er++++C +kw+nl +++kk+ + +
  GBG85400.1 149 GMGHAYSRMKAREWKWNDVARRLKNVGVERKAEKCGQKWDNLMQQFKKVHHFQ 201
                 5778888999**************************************98765 PP
Sequence ? help Back to Top
Protein Sequence    Length: 383 aa     Download sequence    
MQSPSPVSAA SNLGRRRGIV AERGGNLDDV GDDHDGRLLW AEQRRELREG REEAIRRGVE  60
RLRMDGQAEE VEEPDVGFRS KKTTTTTKEK EGTGTGVTPR HQGTATWVGR AARRRRRAGM  120
VMGGRRKHKL SRTTKTATAR QRRSETFGGM GHAYSRMKAR EWKWNDVARR LKNVGVERKA  180
EKCGQKWDNL MQQFKKVHHF QSSSGGIDFF QLSAKERASK GFNFNMDRAI YDKIKGLTGL  240
NETINPKNII DTGASRGVHL PSTSNADPEA VGDADASAGG DDEEEGSTRG SSQTMGSPSA  300
FGKRKSTRQQ TFVAMTDCME KHGALMAATM ESASKRQCNI QLRQCEALEA EVQVQKTHYA  360
TSDEVSKLMC HALLEIAKAI RER
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G35640.12e-06Trihelix family protein