PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID GBG85590.1
Organism
Chara braunii
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Charophyceae; Charales; Characeae; Chara
Family SRS
Protein Properties Length: 319aa    MW: 33816.1 Da    PI: 8.3634
Description SRS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
GBG85590.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF702157.21.1e-48572236153
      DUF702   6 asCqdCGnqakkdCaheRCRtCCksrgfdCathvkstWvpaakrrerqqqlaaasskaaasaaeaaskrkrelkskkqsalsstklssaeskkeletss 104
                 ++Cq+CGn+ak+dC+++RCRtCCksrgf C thvkstWvpaakrre+q+++a  ++++  +  ++ +k +r+++s+  + +sst l+s++ + +l +  
  GBG85590.1  57 MACQECGNRAKRDCNYNRCRTCCKSRGFVCPTHVKSTWVPAAKRREKQRAEAINHTNSPDHLLASLEKVNRSSSSSLPTCSSSTILTSSQGRPSLLALG 155
                 79***************************************************9999999999999999999877776666666665555444443333 PP

      DUF702 105 ...................lPeevsseavfrcvrvssvddgeeelaYqtavsigGhvfkGiLydqGle 153
                                    lP+e+ ++ + ++v+++++ dg  e++Y+++ +igG vfkG+L++ G++
  GBG85590.1 156 papdmmamtagvggnkvssLPSEITAHTLLKSVKMTGIVDGVLEVGYHASTKIGGQVFKGVLFNAGPD 223
                 689999999*********************************************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 319 aa     Download sequence    
MISSGKRLFP YEHHPLDSDF LTENGTAMEQ PPSQLKVVPA GSGGTTASLR EDQPTPMACQ  60
ECGNRAKRDC NYNRCRTCCK SRGFVCPTHV KSTWVPAAKR REKQRAEAIN HTNSPDHLLA  120
SLEKVNRSSS SSLPTCSSST ILTSSQGRPS LLALGPAPDM MAMTAGVGGN KVSSLPSEIT  180
AHTLLKSVKM TGIVDGVLEV GYHASTKIGG QVFKGVLFNA GPDTCCASNS DSHPALTDPS  240
LLALKSAPSA ALLESTGLYG HNLALLGSHL KREDNPATAA GVQSMVRSLL SREYWDNSGQ  300
CGVWGHHHAT NAKYTGDST
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G66350.16e-27SRS family protein