PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

GBG85692.1

Organism

Chara braunii

Taxonomic ID

69332

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Charophyceae; Charales; Characeae; Chara

Family

MYB_related

Protein Properties

Length: 600aa MW: 62281.3 Da PI: 9.7771

Description

MYB_related family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
GBG85692.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	41	4.4e-13	88	132	3	47
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 +WT+eE+ ++ + ++lG+g+W+ I+r ++Rt+ q+ s+ qky GBG85692.1 88 PWTEEEHRMFLLGLQKLGKGDWRGISRNYVQTRTPTQVASHAQKY 132 8*******************************************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 600 aa Download sequence
MTRRCSHCGH NGHNSRTCPD RGVRLFGVRL TENAMRKSVS TGNLNSYPNG NQSSTPDNSE 60 GAAPPDGYVS DGLVQTSTNA RERKKGVPWT EEEHRMFLLG LQKLGKGDWR GISRNYVQTR 120 TPTQVASHAQ KYFIRQSNLN KRKRRSSLFD IVTDGMPLVH VVGVGGAAVG SAGGAGNGST 180 DENVGRRTQT SSSSSPPPTA VPLHHLSHTA GGFQHHHHPS FFDPARSHSF PVAMPAFPLD 240 PQFLHHMLAA AAATMPPQPS ASGPVGDMNP AVAAGPAVTV SSSTAGQRDA VVVTLAAPGP 300 GAAGEHTIVP MRSCSSASPP CPSGCEQQKS LMCSRSDGSS EESRNQQPQH QQEGQDQQRD 360 GGGAVAESGR RPESPSRQAS AMGVTVVTGG AGGGGACGGG RGAPLTALAL SRVLPSAVAG 420 GNPPPPHRPS PAMTFHHFSV LPWPGLSPLG YGLQQHHPHA LHHHGHPPSH PPTASRHQLP 480 QQQHQECAAA GTVTVAARGA PHPPLPGAVV PSNSNSKICR PTACIPTSTV PIPETLGLSI 540 PSHATSSNLS LSPPSAEASS SLTTLRLLEQ PSTRHSAFHA KTSFSSASLT SSSQSAISVV

Sequence ? help Back to Top

Protein Sequence Length: 600 aa Download sequence

MTRRCSHCGH NGHNSRTCPD RGVRLFGVRL TENAMRKSVS TGNLNSYPNG NQSSTPDNSE  60
GAAPPDGYVS DGLVQTSTNA RERKKGVPWT EEEHRMFLLG LQKLGKGDWR GISRNYVQTR  120
TPTQVASHAQ KYFIRQSNLN KRKRRSSLFD IVTDGMPLVH VVGVGGAAVG SAGGAGNGST  180
DENVGRRTQT SSSSSPPPTA VPLHHLSHTA GGFQHHHHPS FFDPARSHSF PVAMPAFPLD  240
PQFLHHMLAA AAATMPPQPS ASGPVGDMNP AVAAGPAVTV SSSTAGQRDA VVVTLAAPGP  300
GAAGEHTIVP MRSCSSASPP CPSGCEQQKS LMCSRSDGSS EESRNQQPQH QQEGQDQQRD  360
GGGAVAESGR RPESPSRQAS AMGVTVVTGG AGGGGACGGG RGAPLTALAL SRVLPSAVAG  420
GNPPPPHRPS PAMTFHHFSV LPWPGLSPLG YGLQQHHPHA LHHHGHPPSH PPTASRHQLP  480
QQQHQECAAA GTVTVAARGA PHPPLPGAVV PSNSNSKICR PTACIPTSTV PIPETLGLSI  540
PSHATSSNLS LSPPSAEASS SLTTLRLLEQ PSTRHSAFHA KTSFSSASLT SSSQSAISVV

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G47390.1	3e-73	MYB_related family protein