PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

GBG85761.1

Organism

Chara braunii

Taxonomic ID

69332

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Charophyceae; Charales; Characeae; Chara

Family

Trihelix

Protein Properties

Length: 524aa MW: 57331.1 Da PI: 8.8777

Description

Trihelix family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
GBG85761.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	trihelix	40.8	5.8e-13	263	350	2	85
trihelix 2 WtkqevlaLiearremeerlrrgk......lkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdql 85 W+++ ++aL++a+re +++++ + +W++v k+++e g++rs k+Ck++w+nl + +ki++++++ + +++++ + d++ GBG85761.1 263 WSHSDTMALVRAKREEVALFNSSSsrqrckTRPERWADVMKALHESGVRRSYKECKKRWDNLLQMVRKIADWNQQ--CLAQKNYWLMDRV 350 ************8877777653333333999***************************************8..7888887777766 PP

Sequence ? help Back to Top
Protein Sequence Length: 524 aa Download sequence
MTGYLKGIQT RISERERPWS GSVHACGVSH TLSPSSASVH GRGVSHTLPP SSASGLTSSK 60 LYSHGVLPSQ TVRLLQTGLP PSHAHSAPSS YSTAVALQGT RSSKGSDPST LHPWTESGLH 120 AVDKSPSRGQ TSASLPSSSS SGASQLQSSS SVYPVPCNRA CMQSATIPCM QSALQCMQTK 180 QSPPTDGMLA LPGSESSPVS TRRQPPLATP FSAGDALGVT RGDNSTRDSH GDEAVDNVDN 240 DVIRSCKSSY LRMTDRQRRG APWSHSDTMA LVRAKREEVA LFNSSSSRQR CKTRPERWAD 300 VMKALHESGV RRSYKECKKR WDNLLQMVRK IADWNQQCLA QKNYWLMDRV ERRAKGMVFN 360 VEREVFDSMI EWVSRKRPSG AKGADSPVDA GGEDPAAAVD REEACNPDAA PQSRVDDIPN 420 TEKAPQEASH QPILPPLLGL DEKKNTDIKH AIQELTSAIR ESSKQLCSTL HEVWQSHQAV 480 LDKHTRSLER ITEVIVVGNQ RFEHAMMHVS ESIHGLREQV NSRP

Sequence ? help Back to Top

Protein Sequence Length: 524 aa Download sequence

MTGYLKGIQT RISERERPWS GSVHACGVSH TLSPSSASVH GRGVSHTLPP SSASGLTSSK  60
LYSHGVLPSQ TVRLLQTGLP PSHAHSAPSS YSTAVALQGT RSSKGSDPST LHPWTESGLH  120
AVDKSPSRGQ TSASLPSSSS SGASQLQSSS SVYPVPCNRA CMQSATIPCM QSALQCMQTK  180
QSPPTDGMLA LPGSESSPVS TRRQPPLATP FSAGDALGVT RGDNSTRDSH GDEAVDNVDN  240
DVIRSCKSSY LRMTDRQRRG APWSHSDTMA LVRAKREEVA LFNSSSSRQR CKTRPERWAD  300
VMKALHESGV RRSYKECKKR WDNLLQMVRK IADWNQQCLA QKNYWLMDRV ERRAKGMVFN  360
VEREVFDSMI EWVSRKRPSG AKGADSPVDA GGEDPAAAVD REEACNPDAA PQSRVDDIPN  420
TEKAPQEASH QPILPPLLGL DEKKNTDIKH AIQELTSAIR ESSKQLCSTL HEVWQSHQAV  480
LDKHTRSLER ITEVIVVGNQ RFEHAMMHVS ESIHGLREQV NSRP

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G35640.1	2e-10	Trihelix family protein