PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

GBG85762.1

Organism

Chara braunii

Taxonomic ID

69332

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Charophyceae; Charales; Characeae; Chara

Family

G2-like

Protein Properties

Length: 663aa MW: 65038.8 Da PI: 5.1562

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
GBG85762.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	95.9	3e-30	429	482	1	55
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 +prl+Wtp+LH+rFv+av++L G+++A+Pkti++lm+v+gLt+e+v+SHLQkYRl GBG85762.1 429 RPRLVWTPQLHKRFVDAVSHL-GIKNAVPKTIMQLMNVEGLTRENVASHLQKYRL 482 59*****************.******************************8 PP
2	Myb_DNA-binding	48.4	2.2e-15	431	481	1	48
TSSS-HHHHHHHHHHHHHTTTT..-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg..tWktIartmg.kgRtlkqcksrwqkyl 48 r+ WT+++++++vdav lG + +ktI++ m+ +g+t++++ s++qky+ GBG85762.1 431 RLVWTPQLHKRFVDAVSHLGIKnaVPKTIMQLMNvEGLTRENVASHLQKYR 481 789*****************9*************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 663 aa Download sequence
MDSSKSERMM EKEGFAGEGG VRRDIYKGME EGEGGQERWG GGYTAGEGGG EGGGGGGGGG 60 GGGGGGGGCM EWERGLPATE ELTPLNQTLI DPLLAHAFSI SEGGFPGGGG TEEAAGVANG 120 GAGRWAVPPS VFSFLDSSSK GGGVKGGGAG GNKTSGGKGS ALQLFGMNGA GSNPEEEAAF 180 SSFDQYANRF NPASEERGGR EGGGGELNES RGEEEQGTEG TFENAEDAGD GGAVFKERPD 240 GAAAPPGGGG VSAGRVASPN DAAAQVQGLA AEGGSHLYGV GGHISSASTD GCGEGEGGGA 300 GNGFNFSPSS VRGNVYAATA SIQQHQSHHV QQAQHQNGTR SDSNNGGDGG AGCGAAAGSH 360 VVNGVSNLSS LGGSGAGVGS GAGGAEGGVK KVKKPGQDPD CDDVDSGGMP PLSNRSDSSD 420 DPVPRTLKRP RLVWTPQLHK RFVDAVSHLG IKNAVPKTIM QLMNVEGLTR ENVASHLQKY 480 RLYLKRLPTE GPSAGVELFG GLPQPRAATP ATAAAAAAAA AAVGLTCGGV HYAQHRDAEI 540 APHAGGLFGD ASGHMPPTPA AVVLSHTGFL GAPMKPAPPA GAGAGAAMQG AQGTGGGGGA 600 PGGTAAPNGG PVLDYHMYKG YCSSGVLGGR TGVPDSCGIE QHNVDSPSSS KMLSLFPTSS 660 VGS

Sequence ? help Back to Top

Protein Sequence Length: 663 aa Download sequence

MDSSKSERMM EKEGFAGEGG VRRDIYKGME EGEGGQERWG GGYTAGEGGG EGGGGGGGGG  60
GGGGGGGGCM EWERGLPATE ELTPLNQTLI DPLLAHAFSI SEGGFPGGGG TEEAAGVANG  120
GAGRWAVPPS VFSFLDSSSK GGGVKGGGAG GNKTSGGKGS ALQLFGMNGA GSNPEEEAAF  180
SSFDQYANRF NPASEERGGR EGGGGELNES RGEEEQGTEG TFENAEDAGD GGAVFKERPD  240
GAAAPPGGGG VSAGRVASPN DAAAQVQGLA AEGGSHLYGV GGHISSASTD GCGEGEGGGA  300
GNGFNFSPSS VRGNVYAATA SIQQHQSHHV QQAQHQNGTR SDSNNGGDGG AGCGAAAGSH  360
VVNGVSNLSS LGGSGAGVGS GAGGAEGGVK KVKKPGQDPD CDDVDSGGMP PLSNRSDSSD  420
DPVPRTLKRP RLVWTPQLHK RFVDAVSHLG IKNAVPKTIM QLMNVEGLTR ENVASHLQKY  480
RLYLKRLPTE GPSAGVELFG GLPQPRAATP ATAAAAAAAA AAVGLTCGGV HYAQHRDAEI  540
APHAGGLFGD ASGHMPPTPA AVVLSHTGFL GAPMKPAPPA GAGAGAAMQG AQGTGGGGGA  600
PGGTAAPNGG PVLDYHMYKG YCSSGVLGGR TGVPDSCGIE QHNVDSPSSS KMLSLFPTSS  660
VGS

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	198	205	GGREGGGG

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G46640.3	1e-39	G2-like family protein