PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

GBG86004.1

Organism

Chara braunii

Taxonomic ID

69332

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Charophyceae; Charales; Characeae; Chara

Family

E2F/DP

Protein Properties

Length: 499aa MW: 52920 Da PI: 5.6486

Description

E2F/DP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
GBG86004.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	E2F_TDP	87.8	7.8e-28	150	232	2	71
E2F_TDP 2 keksLrlltqkflklleksee.givtlnevakeLvse................dvknkrRRiYDilNVLealnliekkekneirwkg 71 ++k+Lr++++k ++ek+e+ g++t+neva+eLv+e d+kn+rRR+YD+lNVL+a+++i+k ek++i+wkg GBG86004.1 150 SGKGLRHFSMK---VCEKVESkGRTTYNEVADELVTEfsnpenlmasgdqqpyDEKNIRRRVYDALNVLMAMDIISK-EKKDIQWKG 232 78*******...*999***************************************************.*****98 PP

Sequence ? help Back to Top
Protein Sequence Length: 499 aa Download sequence
MAGTSSGAMP GSLHDVLLRD FQETGLYEFA EDLGMIQGGD IASLRDTAGP GPGPAVSSSL 60 ELPAAGIPVG PVVGGVVVAA AANNNNNNNN NNNNNSNNTL LNGYASSQTI SRCINGGGRA 120 LDHGSEDADS PDMMGRKRKR TQRPSAGDKS GKGLRHFSMK VCEKVESKGR TTYNEVADEL 180 VTEFSNPENL MASGDQQPYD EKNIRRRVYD ALNVLMAMDI ISKEKKDIQW KGLPSTAVTD 240 AENVKADLVR LKAKLQKKQS YLQELIEQHD ALKNLARRNE RMYRGMPGAT QSCPGISVPF 300 FLVQTKQHAT VEVEMSETFE VFHFDFNDTP FELRDDFYIL KCMGLHRHQP EEGVVTASPA 360 LPAQCSPPQA RQANPETGSP QACAASSSAL QRTMVSGFSA QPPISQQQHA SLVNVQSATG 420 SSSAAVVSSP VVQRGIPAAV AASGGITQSQ PHAVQAVGSV MSADTSEGGG GGEGQLGSLP 480 STAIPQGDPV AIGNFEEQR

Sequence ? help Back to Top

Protein Sequence Length: 499 aa Download sequence

MAGTSSGAMP GSLHDVLLRD FQETGLYEFA EDLGMIQGGD IASLRDTAGP GPGPAVSSSL  60
ELPAAGIPVG PVVGGVVVAA AANNNNNNNN NNNNNSNNTL LNGYASSQTI SRCINGGGRA  120
LDHGSEDADS PDMMGRKRKR TQRPSAGDKS GKGLRHFSMK VCEKVESKGR TTYNEVADEL  180
VTEFSNPENL MASGDQQPYD EKNIRRRVYD ALNVLMAMDI ISKEKKDIQW KGLPSTAVTD  240
AENVKADLVR LKAKLQKKQS YLQELIEQHD ALKNLARRNE RMYRGMPGAT QSCPGISVPF  300
FLVQTKQHAT VEVEMSETFE VFHFDFNDTP FELRDDFYIL KCMGLHRHQP EEGVVTASPA  360
LPAQCSPPQA RQANPETGSP QACAASSSAL QRTMVSGFSA QPPISQQQHA SLVNVQSATG  420
SSSAAVVSSP VVQRGIPAAV AASGGITQSQ PHAVQAVGSV MSADTSEGGG GGEGQLGSLP  480
STAIPQGDPV AIGNFEEQR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G03415.1	6e-89	E2F/DP family protein