PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID GBG86386.1
Organism
Chara braunii
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Charophyceae; Charales; Characeae; Chara
Family Trihelix
Protein Properties Length: 296aa    MW: 32822.8 Da    PI: 10.6761
Description Trihelix family protein
Gene Model
Gene Model ID Type Source Coding Sequence
GBG86386.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1trihelix37.65.6e-1241116270
    trihelix   2 WtkqevlaLiearremeerlr.......rgklkkplWeevskkmrergferspkqCkekwenlnkrykkikegekk 70 
                 W+ +   aLi+a+++ + +l+       r k ++ +W +  +++++ g+ r++++C +kw+nl +++kk+ + ++ 
  GBG86386.1  41 WSVDDMIALIRAKSDQDAHLQgmgtafaRMKPREWKWLDAEQRLKKVGVDREAERCSKKWDNLMQQFKKVHHFQGL 116
                 99999*********666666633332226688888999999999*************************9887665 PP
Sequence ? help Back to Top
Protein Sequence    Length: 296 aa     Download sequence    
MGGRGGKTRA CGRNGRRGKL AVGKGSDAEA DADAEGGRQF WSVDDMIALI RAKSDQDAHL  60
QGMGTAFARM KPREWKWLDA EQRLKKVGVD REAERCSKKW DNLMQQFKKV HHFQGLSGKQ  120
DFFRFSGKER LSKGFNFNMD RAVYDEILGS TTKSHTINPK NVADTGAPGG VRLPSAASAD  180
HESVGDGDAA ARHDDDDDGS TRGSSQTTRS PAGFGKRKST RQQTFEALTE CMEKHGLWWR  240
RRLRATTSGS APSKSGSARR WKQRSKCKKK NYAASDEVSK LMCHALLEIA KAIRER
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G35640.11e-08Trihelix family protein