PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

GBG86518.1

Organism

Chara braunii

Taxonomic ID

69332

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Charophyceae; Charales; Characeae; Chara

Family

Trihelix

Protein Properties

Length: 562aa MW: 59739.9 Da PI: 6.5196

Description

Trihelix family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
GBG86518.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	trihelix	28	5.7e-09	294	366	1	67
trihelix 1 rWtkqevlaLiearremeerlrrgk......lkkplWeevskkmrergferspkqCkekwenlnkrykkikeg 67 +W +e laL +++re++ + +++ + + + e+++ +mr++g +rs++ C++kw l ++ k++++ GBG86518.1 294 QWLLEECLALARIQREDDALMADASsvhelkKHGERREWIAHRMRDEGWNRSAEDCRKKWFALGQKLKALADK 366 699***********9999998644444448899***********************9999999988775 PP

Sequence ? help Back to Top
Protein Sequence Length: 562 aa Download sequence
MDRRRWSQEA TFQEQYGETK HRNRSEGVRG LQPAPPQAHL SMLSQDADRY GVPPSFPSQV 60 ASLPQWQNDP PGLREMRCAS QLPFQQSVMV AAYDGQQMLG SPQPRATSSP FSGFAARSVP 120 PPGFTATLLG EDDDVECGVD GSGARFGVTG DRRADHEREH GNAAKGRCGD ASHEFGCYEQ 180 CGGGHVPTVD TSNPSRLAAE WSGHATPAQG QQPDAGDVPA AAVLQQPSPF APATGAGAGK 240 GPTGRRRGRP PAATSTSAQA GGCVDGSTVM QGMDAGGIRG RAGAQASPAQ KKVQWLLEEC 300 LALARIQRED DALMADASSV HELKKHGERR EWIAHRMRDE GWNRSAEDCR KKWFALGQKL 360 KALADKVGRF GKPGYFDMTV EEREAEGLYA NFDRRLWAEM EWILQKPSET CDNTLNSDSL 420 NAKDGDSSAR GSSDRGGSDR ERSDGNTSAE KTRRTSSGRV NDGDGPSSMS GMSVALAEST 480 RVYVDGLDKA AATIAEAQTA GATMVAGRLG DMATQIGAVA TAMTEGNGVL QLLVGVMASR 540 GPRGPNSPRE ARGGRDNNPS SL

Sequence ? help Back to Top

Protein Sequence Length: 562 aa Download sequence

MDRRRWSQEA TFQEQYGETK HRNRSEGVRG LQPAPPQAHL SMLSQDADRY GVPPSFPSQV  60
ASLPQWQNDP PGLREMRCAS QLPFQQSVMV AAYDGQQMLG SPQPRATSSP FSGFAARSVP  120
PPGFTATLLG EDDDVECGVD GSGARFGVTG DRRADHEREH GNAAKGRCGD ASHEFGCYEQ  180
CGGGHVPTVD TSNPSRLAAE WSGHATPAQG QQPDAGDVPA AAVLQQPSPF APATGAGAGK  240
GPTGRRRGRP PAATSTSAQA GGCVDGSTVM QGMDAGGIRG RAGAQASPAQ KKVQWLLEEC  300
LALARIQRED DALMADASSV HELKKHGERR EWIAHRMRDE GWNRSAEDCR KKWFALGQKL  360
KALADKVGRF GKPGYFDMTV EEREAEGLYA NFDRRLWAEM EWILQKPSET CDNTLNSDSL  420
NAKDGDSSAR GSSDRGGSDR ERSDGNTSAE KTRRTSSGRV NDGDGPSSMS GMSVALAEST  480
RVYVDGLDKA AATIAEAQTA GATMVAGRLG DMATQIGAVA TAMTEGNGVL QLLVGVMASR  540
GPRGPNSPRE ARGGRDNNPS SL