PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID GBG86658.1
Organism
Chara braunii
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Charophyceae; Charales; Characeae; Chara
Family Trihelix
Protein Properties Length: 353aa    MW: 38519.9 Da    PI: 8.939
Description Trihelix family protein
Gene Model
Gene Model ID Type Source Coding Sequence
GBG86658.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1trihelix39.61.3e-1265143276
    trihelix   2 WtkqevlaLiearremeerlr......rgklkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkrtsess 76 
                 W+   +laL++a+re  e+l       r+k +  +W+++ +k+r+ g+ r  k+C+ +wenl + y+k+ e+e++  +++ 
  GBG86658.1  65 WSAPDTLALVRAKREEAEELAslpvnaRNKPASEKWASIVAKLRSWGVDRDLKMCTRRWENLCRLYRKVLEHERS--PGKP 143
                 ****************9999955555457899****************************************998..4444 PP
Sequence ? help Back to Top
Protein Sequence    Length: 353 aa     Download sequence    
MRQEPPSSPV SDDCALVPAN AVGSIPGTPE RPVSTPASQD GATQTGQRKG MKRRATAETP  60
RSGNWSAPDT LALVRAKREE AEELASLPVN ARNKPASEKW ASIVAKLRSW GVDRDLKMCT  120
RRWENLCRLY RKVLEHERSP GKPSFWNLTP AERKGAHVNF NLERQVYDEM AKFVGPRESL  180
TPMRMLDLPN LDGNAQYGNS NGEGGGDSDG GESEPEHGES DAGDRMTDQN GSAGTSSAGK  240
RRRPQANHRG ENEARDHRHR KSMAAVIAKL TDTVRTRGEA FATAFAVASG RQADLISETH  300
LIMREQTQVM REANAVMDSG NKALCQALEG LSSALNSIAR SLATPSNLDW RPN
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G35640.14e-14Trihelix family protein