PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

GBG87841.1

Organism

Chara braunii

Taxonomic ID

69332

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Charophyceae; Charales; Characeae; Chara

Family

Trihelix

Protein Properties

Length: 608aa MW: 67360.5 Da PI: 8.4848

Description

Trihelix family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
GBG87841.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	trihelix	25.4	3.8e-08	321	396	2	70
trihelix 2 WtkqevlaLiearremeerlrrg.......klkkplWeevskkmrergferspkqCkekwenlnkrykkikegekk 70 W + +L++ +re +e+l ++ k k+ +W +++k+m+ g++r+ C ++wen+ ykk++ +ek+ GBG87841.1 321 WNLDDSITLVRCKREHDETLAAAghnfarmKTKQWKWTDIAKRMEVLGVTREWDVCMKRWENMFSWYKKVQWREKE 396 6666777888888877777775423333337999***********************************9988876 PP

Sequence ? help Back to Top
Protein Sequence Length: 608 aa Download sequence
MADHARKLSL LCVLVLLLLL LLILHLWSSR RARVVPHKRK LTRSSKHPAC KGGMGAGGDG 60 ADMFMYGVTG GGGEGCFPSD TPRYDPALYA HLPPHLQSLP DDENWQPPPS TFNLTHGSTQ 120 SISDSGVWVG DQQPRQGPMT SLLFDGLHQR MCPPLDLQLS SGVRPVASRT LIINPASRSE 180 GDASVGQSAR RPGAASLQPT AAPAKTNIHA GPTVTRPMAR VRASSEGRQA NVVDDIIAKV 240 STMRATSDGD GSAGGGADCE IVEDAAADDV EEEDDEVDAE EPWPTIKSQK KTPARKPAPK 300 GRGKGTAKDG GGESGGGRII WNLDDSITLV RCKREHDETL AAAGHNFARM KTKQWKWTDI 360 AKRMEVLGVT REWDVCMKRW ENMFSWYKKV QWREKESGLQ SFFTLTLKER ADKGYNVVAW 420 PLKAIHVSEG GGGVERECGV CKRVVKEHSR SPFDRQPSQA ATMDIVICYR DVVLNRTVVF 480 YEYRHRRGNS HGRAMEFDHH VNHEDFRYYE ANANAVTCLA VVVGFRFGRR ALREVIMHIT 540 RVGTAVPTRF VGGVDVLAEM VRMLISNFAM EFRDRMHHPA TYTVVLHAPF EQRQDLHGDI 600 DILREGMF

Sequence ? help Back to Top

Protein Sequence Length: 608 aa Download sequence

MADHARKLSL LCVLVLLLLL LLILHLWSSR RARVVPHKRK LTRSSKHPAC KGGMGAGGDG  60
ADMFMYGVTG GGGEGCFPSD TPRYDPALYA HLPPHLQSLP DDENWQPPPS TFNLTHGSTQ  120
SISDSGVWVG DQQPRQGPMT SLLFDGLHQR MCPPLDLQLS SGVRPVASRT LIINPASRSE  180
GDASVGQSAR RPGAASLQPT AAPAKTNIHA GPTVTRPMAR VRASSEGRQA NVVDDIIAKV  240
STMRATSDGD GSAGGGADCE IVEDAAADDV EEEDDEVDAE EPWPTIKSQK KTPARKPAPK  300
GRGKGTAKDG GGESGGGRII WNLDDSITLV RCKREHDETL AAAGHNFARM KTKQWKWTDI  360
AKRMEVLGVT REWDVCMKRW ENMFSWYKKV QWREKESGLQ SFFTLTLKER ADKGYNVVAW  420
PLKAIHVSEG GGGVERECGV CKRVVKEHSR SPFDRQPSQA ATMDIVICYR DVVLNRTVVF  480
YEYRHRRGNS HGRAMEFDHH VNHEDFRYYE ANANAVTCLA VVVGFRFGRR ALREVIMHIT  540
RVGTAVPTRF VGGVDVLAEM VRMLISNFAM EFRDRMHHPA TYTVVLHAPF EQRQDLHGDI  600
DILREGMF