PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID GBG88448.1
Organism
Chara braunii
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Charophyceae; Charales; Characeae; Chara
Family Trihelix
Protein Properties Length: 617aa    MW: 68996.9 Da    PI: 3.5227
Description Trihelix family protein
Gene Model
Gene Model ID Type Source Coding Sequence
GBG88448.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1trihelix26.81.3e-081692181867
    trihelix  18 eerlrrgklkkplWeevskkmrergferspkqCkekwenlnkrykkikeg 67 
                 +++++r + k  +W++++k m++ g  r    C +kw+nl + ykki++ 
  GBG88448.1 169 GHNYGRMRTKDWKWDDIAKGMAKAGRPRDTDDCMKKWDNLFQNYKKIQRL 218
                 45566788999***********************************9875 PP
Sequence ? help Back to Top
Protein Sequence    Length: 617 aa     Download sequence    
MASMQAHAEL AAGQGGRGPV SAVWGRRYDP SLYNHLELSE TPLPPSDEEA ETEELPTLPL  60
GSGWTQMLSQ TVRACWSASN EGGEFTSLLQ QGLGDDDDVG VNLRFGLSSG NARETTRTFI  120
IDVVPSPRGL QRAESQHTEQ STLHGGASDD QLLLVRCKRE QDMHLAGLGH NYGRMRTKDW  180
KWDDIAKGMA KAGRPRDTDD CMKKWDNLFQ NYKKIQRLKN VGGWADFLRQ SNKERKEDNF  240
KFRMDKVQYN EIHGGMLGNN TIFPPNVADT GNPDGVQLPR RGAAGGSLLI VRPAVMAALK  300
NALRRWSPTT MQAVGVQAGS GRMHVNRCWN DAAAGADDDD NAAAAAAADD NDDDDDDDDD  360
DDDDDDDDDD DDDDGGGDDD DDDDDDDDDD DDDDDDDDDV DVDDDDEDGD DDKDGDDEDD  420
EHDDNDDDDD DDDDDDDDDD DEDDEDDEDD EDEDDDDDDD DDDDDDDDDD DDDDDDDDDD  480
DDDDDDDDDD DDDENDDDDD DDDDDDDDDD DDDDDDDDDD DDDDDDDGHR ENDGEATAMI  540
TTMMTWQSIH EDQRVDLLTL FCDEFAKHVI AKPQLTILSS LVWDIIVMRR IDFASVFLVL  600
LISTRRSNEH DMWDLVC