PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

GBG88564.1

Organism

Chara braunii

Taxonomic ID

69332

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Charophyceae; Charales; Characeae; Chara

Family

Trihelix

Protein Properties

Length: 573aa MW: 59908.6 Da PI: 6.6993

Description

Trihelix family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
GBG88564.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	trihelix	36.7	1.1e-11	277	330	17	70
trihelix 17 meerlrrgklkkplWeevskkmrergferspkqCkekwenlnkrykkikegekk 70 + +++++ +k W+ v+++m+e gf+rs++qC++k+e + ++++ +k+ +++ GBG88564.1 277 QQMKFKNQGNNKENWKIVAARMSENGFKRSSEQCRKKFERIWRKFQDLKADNER 330 45667778899**************************************99986 PP

Sequence ? help Back to Top
Protein Sequence Length: 573 aa Download sequence
MQGSVISPST SQAQAAQRTP GGGEARNVLP CSGSPTSATH SSQGGNLAQF PSASGVSGHA 60 HYLPRMSDGV SVGRSPPPGG GRATVSSPQS YTVTSLSGGG AEAHQAAQSQ AHRERGGDGV 120 GASNDGGGGR VVTAATDCAR VGGGGGGGGG GGGEGRGGMD GVGVAVDGSG SGDGTPPPIV 180 RGSMKVEPGD SPGDRESCTD VFERDDTMLV QMWYTDSSEK RDDRLPACVV VNGGCLLFFG 240 LMLSAMTLHV CDGLVIAWFA LPDRAVRSWM EGGVTSQQMK FKNQGNNKEN WKIVAARMSE 300 NGFKRSSEQC RKKFERIWRK FQDLKADNER SGGLEFKGHG AGFPHVYDLI VSSPMVIMRS 360 NHPSRSAADL FHSEIQEVAV PAALAPAPPI HAPPTLAMPK TPRCPTFSAV RSPGADVPAG 420 LDEEGGGLGC QATPGTLVIR MPLARCTEAV EGERHDAQTG NEGTGDVTET GRPSDDLDGD 480 RGRDGGSVKK GKLGGAKSRQ ALMETMMGLL AEMDKKFWDS YDDRVRQQSE SQQKRDEMEA 540 MERRETNSIL RSLVDRLIKE GASSHGTAKG AQT

Sequence ? help Back to Top

Protein Sequence Length: 573 aa Download sequence

MQGSVISPST SQAQAAQRTP GGGEARNVLP CSGSPTSATH SSQGGNLAQF PSASGVSGHA  60
HYLPRMSDGV SVGRSPPPGG GRATVSSPQS YTVTSLSGGG AEAHQAAQSQ AHRERGGDGV  120
GASNDGGGGR VVTAATDCAR VGGGGGGGGG GGGEGRGGMD GVGVAVDGSG SGDGTPPPIV  180
RGSMKVEPGD SPGDRESCTD VFERDDTMLV QMWYTDSSEK RDDRLPACVV VNGGCLLFFG  240
LMLSAMTLHV CDGLVIAWFA LPDRAVRSWM EGGVTSQQMK FKNQGNNKEN WKIVAARMSE  300
NGFKRSSEQC RKKFERIWRK FQDLKADNER SGGLEFKGHG AGFPHVYDLI VSSPMVIMRS  360
NHPSRSAADL FHSEIQEVAV PAALAPAPPI HAPPTLAMPK TPRCPTFSAV RSPGADVPAG  420
LDEEGGGLGC QATPGTLVIR MPLARCTEAV EGERHDAQTG NEGTGDVTET GRPSDDLDGD  480
RGRDGGSVKK GKLGGAKSRQ ALMETMMGLL AEMDKKFWDS YDDRVRQQSE SQQKRDEMEA  540
MERRETNSIL RSLVDRLIKE GASSHGTAKG AQT