PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

GBG88567.1

Organism

Chara braunii

Taxonomic ID

69332

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Charophyceae; Charales; Characeae; Chara

Family

Trihelix

Protein Properties

Length: 554aa MW: 60848.4 Da PI: 6.3065

Description

Trihelix family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
GBG88567.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	trihelix	36.1	1.6e-11	218	269	20	71
trihelix 20 rlrrgklkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkr 71 +++++ +k W+ vs++m e gf+rs++qC++k+e + ++++ +++ + +r GBG88567.1 218 KFKNQGNNKENWKIVSSRMLENGFKRSSEQCRKKFERIWRKFQDLRAENVRR 269 56777899************************************99988765 PP

Sequence ? help Back to Top
Protein Sequence Length: 554 aa Download sequence
MEEVMLVVEE RQGMGEIGEK GWKVDNNNNN NNNNNSNDDG ELGLAEIGDE GEKDDNNNNN 60 NNNNNNNNNN GNNNNGSDNK EMEEMGENNN NNNNDGVNDN NDNNNNSNKI NNNHDDVGDD 120 NHGSRRAERG CCASKPCISS MVEMPPSTLW GGISSLLGLV KWGLCLKWRR FLSEGYVLES 180 VGANAGCLHV CNCGLVMAFS DRAVRSGIEG GAVSQQVKFK NQGNNKENWK IVSSRMLENG 240 FKRSSEQCRK KFERIWRKFQ DLRAENVRRG GLEFKGHGAG FPHVYDLIIN SPMVSVRLGE 300 RSHPSRSTDV YHSEIPETLP VAAALTPVHA QPVAFSVKGP RGPTFSSVGS PGAEPSAVAS 360 VLEENSFARQ VLPPGGPVVG MPLVRPEAVD TRRHDAQVGS EGVGGGTDTA ARDSLDVEPG 420 RDLKRGKFVG VKSRQVLLKT MMGLLAEMDT KFWDSYDRRV CQQSECQRVK ETVPWPTSDK 480 RGDVQTAGIS SIEGRQHLVE NTTSISWHVY RVASGTQSCG TQVELKAVVL KVELKDCGTQ 540 VELRWNSRLR NSQL

Sequence ? help Back to Top

Protein Sequence Length: 554 aa Download sequence

MEEVMLVVEE RQGMGEIGEK GWKVDNNNNN NNNNNSNDDG ELGLAEIGDE GEKDDNNNNN  60
NNNNNNNNNN GNNNNGSDNK EMEEMGENNN NNNNDGVNDN NDNNNNSNKI NNNHDDVGDD  120
NHGSRRAERG CCASKPCISS MVEMPPSTLW GGISSLLGLV KWGLCLKWRR FLSEGYVLES  180
VGANAGCLHV CNCGLVMAFS DRAVRSGIEG GAVSQQVKFK NQGNNKENWK IVSSRMLENG  240
FKRSSEQCRK KFERIWRKFQ DLRAENVRRG GLEFKGHGAG FPHVYDLIIN SPMVSVRLGE  300
RSHPSRSTDV YHSEIPETLP VAAALTPVHA QPVAFSVKGP RGPTFSSVGS PGAEPSAVAS  360
VLEENSFARQ VLPPGGPVVG MPLVRPEAVD TRRHDAQVGS EGVGGGTDTA ARDSLDVEPG  420
RDLKRGKFVG VKSRQVLLKT MMGLLAEMDT KFWDSYDRRV CQQSECQRVK ETVPWPTSDK  480
RGDVQTAGIS SIEGRQHLVE NTTSISWHVY RVASGTQSCG TQVELKAVVL KVELKDCGTQ  540
VELRWNSRLR NSQL