PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID GBG88598.1
Organism
Chara braunii
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Charophyceae; Charales; Characeae; Chara
Family Trihelix
Protein Properties Length: 379aa    MW: 42404.6 Da    PI: 8.7851
Description Trihelix family protein
Gene Model
Gene Model ID Type Source Coding Sequence
GBG88598.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1trihelix35.42.8e-11159231267
    trihelix   2 WtkqevlaLiearr.......emeerlrrgklkkplWeevskkmrergferspkqCkekwenlnkrykkikeg 67 
                 W+ + + aL++a+r        me++++r k ++ +We+v +++++  ++r+ + C +kw+nl +++kk+ + 
  GBG88598.1 159 WSVKDTIALVRAKRdqdlyfaGMEHNFGRMKTREWKWEDVRSRLQKMDVTRKVVNCGKKWDNLMQQFKKVHKF 231
                 999***********99999999***********************************************9875 PP
Sequence ? help Back to Top
Protein Sequence    Length: 379 aa     Download sequence    
MGITRSKRWL VRAGREKAAY LNRFARAEGI EMCPRGMAEE ESTRINVRNG RAYHLRCETD  60
PGLCMDGNDR RTRPRQLRTW NETVGSCNDA AVQEPLDFDD VDGDDDCNSD DLPEIRPLGR  120
KVRNDGASAK KGSTPRNRRN KKMNDDTGGS DGEGARNFWS VKDTIALVRA KRDQDLYFAG  180
MEHNFGRMKT REWKWEDVRS RLQKMDVTRK VVNCGKKWDN LMQQFKKVHK FQHLSGGKDY  240
FKLASSARRS EGVNFIMDRS VYKEMEAMTK GDHTIHPKNL ADTGVPGAVQ MPAGAGAGGE  300
SMGCEGGGEP VDEEQGSTKD STFSAGSAGG SGKRKNMWQQ TFEAVTEVMD KHGALMASTM  360
DSASKRQCSM MLRQCDMEV
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G31270.17e-08Trihelix family protein