PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID GBG88844.1
Organism
Chara braunii
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Charophyceae; Charales; Characeae; Chara
Family Trihelix
Protein Properties Length: 296aa    MW: 32934.9 Da    PI: 8.9972
Description Trihelix family protein
Gene Model
Gene Model ID Type Source Coding Sequence
GBG88844.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1trihelix36.71.1e-1141110264
    trihelix   2 WtkqevlaLiearr.......emeerlrrgklkkplWeevskkmrergferspkqCkekwenlnkrykki 64 
                 W+ ++  aLi+a+r        m+++++r k+++  W++v +++++ g+er+ ++C +kw+nl +++kk+
  GBG88844.1  41 WSVDHMVALIRAKReqdahlqGMGHAYSRMKRREWNWADVKERLKKVGVERTLEKCGKKWDNLMQQFKKL 110
                 999***********44444444444445779*************************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 296 aa     Download sequence    
MSGRSRTSKA SASTARRGKK GAAAGSEGEG DVEGEGSRNF WSVDHMVALI RAKREQDAHL  60
QGMGHAYSRM KRREWNWADV KERLKKVGVE RTLEKCGKKW DNLMQQFKKL YLFQGESGKH  120
DFFQLTGKER SAHGFNFTMD RVVYEEIKGS TEKSHTIHSE NVADTGGSGG VQLSSGFAGG  180
PESVGDGDPG ANDNDEDDNC TKGSLRASGN TGGFRKKKNV RQQTFEALME CMERYGTLMA  240
MAMESASKRQ CSIQLRQCEA WEAEVEVQRK HYATSNDLSK LMCQALLEIA KAIRER