PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

GBG88979.1

Organism

Chara braunii

Taxonomic ID

69332

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Charophyceae; Charales; Characeae; Chara

Family

Trihelix

Protein Properties

Length: 704aa MW: 76927.3 Da PI: 10.6683

Description

Trihelix family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
GBG88979.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	trihelix	31.7	4e-10	83	151	9	70
trihelix 9 aLiearremeerlr.......rgklkkplWeevskkmrergferspkqCkekwenlnkrykkikegekk 70 Li+a+r+ + +l+ r k ++ +W +v+ ++++ g+er++ C +kw+nl +++kk+ + ++ GBG88979.1 83 SLIRAKRDQDAHLQgmghvyaRMKPREWKWLDVATRLKKVGVEREADWCGKKWDNLMQQFKKVHHFQGL 151 6999999888888844444335689999**********************************9887665 PP

Sequence ? help Back to Top
Protein Sequence Length: 704 aa Download sequence
MARTQWGTRT TPTGTTTALK VGRTTQATFR RRRRRPLCEG GAGRRSRVAA MVVGAKGRQA 60 RAAMPKVTSM VRSFLLVRRR HYSLIRAKRD QDAHLQGMGH VYARMKPREW KWLDVATRLK 120 KVGVEREADW CGKKWDNLMQ QFKKVHHFQG LSGKQDFFQL SGKDMMSKGF SFNMDRAVYD 180 EILGSTAKKH TINPKNVADT GAQGGVRLPS ASSADPESVG DGDGGAEHDD DDDGSTKGSS 240 QTTGGAGGFG KRKSTWQQTF EAMTECMEKH GALMASTMES NNKRHCSIAV WQCRTRSGDR 300 IVFGDILVGE HIFSPFVFTA IVAFPKIVPL SSRLSSSPRS SSNTTPTPPS LLTVGFDSAV 360 HVIEASRANN LAVDVSCAMS SRGSARGKAA ANLAQQPPTR EKKGCHMANK KRKILQGAPT 420 HGGYVVDEEW VPEDVATQEG RNFEDSDDMP LQRKSYRRGS GGLRIDDAGD RRRAGGRAAP 480 EDVLDVDAAT AAREGGGNRA PLPRMTPPTG TQEGVVRLRT PFTPRSRTAA DVATGTRTTA 540 WRLIRRRLVG AFTSAVIIAK TTDGGRVLHE RLKTMADAMR MMLAATMWLM RMAGDDHRAH 600 YDAWVFVQLT AKPTLVASMH RCFNARRHIV QAATVITDKL ASPPITLIDP PMYVPDWASI 660 GVKFSHDATL SSPMEAKKVD WLGTGPPEDE DDGKGDEQGS GGGR

Sequence ? help Back to Top

Protein Sequence Length: 704 aa Download sequence

MARTQWGTRT TPTGTTTALK VGRTTQATFR RRRRRPLCEG GAGRRSRVAA MVVGAKGRQA  60
RAAMPKVTSM VRSFLLVRRR HYSLIRAKRD QDAHLQGMGH VYARMKPREW KWLDVATRLK  120
KVGVEREADW CGKKWDNLMQ QFKKVHHFQG LSGKQDFFQL SGKDMMSKGF SFNMDRAVYD  180
EILGSTAKKH TINPKNVADT GAQGGVRLPS ASSADPESVG DGDGGAEHDD DDDGSTKGSS  240
QTTGGAGGFG KRKSTWQQTF EAMTECMEKH GALMASTMES NNKRHCSIAV WQCRTRSGDR  300
IVFGDILVGE HIFSPFVFTA IVAFPKIVPL SSRLSSSPRS SSNTTPTPPS LLTVGFDSAV  360
HVIEASRANN LAVDVSCAMS SRGSARGKAA ANLAQQPPTR EKKGCHMANK KRKILQGAPT  420
HGGYVVDEEW VPEDVATQEG RNFEDSDDMP LQRKSYRRGS GGLRIDDAGD RRRAGGRAAP  480
EDVLDVDAAT AAREGGGNRA PLPRMTPPTG TQEGVVRLRT PFTPRSRTAA DVATGTRTTA  540
WRLIRRRLVG AFTSAVIIAK TTDGGRVLHE RLKTMADAMR MMLAATMWLM RMAGDDHRAH  600
YDAWVFVQLT AKPTLVASMH RCFNARRHIV QAATVITDKL ASPPITLIDP PMYVPDWASI  660
GVKFSHDATL SSPMEAKKVD WLGTGPPEDE DDGKGDEQGS GGGR

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	30	35	RRRRRR