PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

GBG89218.1

Organism

Chara braunii

Taxonomic ID

69332

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Charophyceae; Charales; Characeae; Chara

Family

Trihelix

Protein Properties

Length: 506aa MW: 55040.8 Da PI: 6.3671

Description

Trihelix family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
GBG89218.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	trihelix	35.6	2.4e-11	269	341	2	67
trihelix 2 WtkqevlaLiearremeerlrrgk.......lkkplWeevskkmrergferspkqCkekwenlnkrykkikeg 67 W+ ++ aLi+++r+ + +l+++ ++ +W +v +++ + g+ r +++C +kw+nl +++kk+ + GBG89218.1 269 WSVEHMVALIRVKRDQDAQLQASGhnfarmrTREWKWMDVPERLLKVGVDRPANKCGKKWDNLMQQFKKVHAF 341 99**********9999999763334444499**********************************9875 PP

Sequence ? help Back to Top
Protein Sequence Length: 506 aa Download sequence
MTVPLGSGST QEWTGSQLYD RRRTKYGQSF TSLLHDGAEE EDCLPPVDLT FGLWSGSPSS 60 ITRTALVNPH PDDDAGQVTF GGRHTRGGAV AKVTSGKTTA WPRTQATSGP SVPRTVGQRP 120 EWMTLSPPLF GGRDCVRRPV DQAVTHEDFP SEGAHGDGRR VWKEARQELR RQQEESITKG 180 VERLCVGERS GQADVAAGGG DAWTNAGEVQ CDVDDDDSGD VFPLRAPNMG GRGIRGSTST 240 RAVRRRTRST TASADAEGEG DGEGGRNFWS VEHMVALIRV KRDQDAQLQA SGHNFARMRT 300 REWKWMDVPE RLLKVGVDRP ANKCGKKWDN LMQQFKKVHA FMSMSGKEDF FQLTSQQRAK 360 KGFNFNMDRA VFEEIKGARE RSHTISPTNV ADTGGAGGVQ LPSAQSATPE SVGDGEAAGD 420 GNDEDDSSAW GGSQTSGGPT GFGKRKNVQQ QTFEALPECM DKHGALLAST MESASKRQCE 480 TMESASKRQC SIQIRQCEAI EAEVEI

Sequence ? help Back to Top

Protein Sequence Length: 506 aa Download sequence

MTVPLGSGST QEWTGSQLYD RRRTKYGQSF TSLLHDGAEE EDCLPPVDLT FGLWSGSPSS  60
ITRTALVNPH PDDDAGQVTF GGRHTRGGAV AKVTSGKTTA WPRTQATSGP SVPRTVGQRP  120
EWMTLSPPLF GGRDCVRRPV DQAVTHEDFP SEGAHGDGRR VWKEARQELR RQQEESITKG  180
VERLCVGERS GQADVAAGGG DAWTNAGEVQ CDVDDDDSGD VFPLRAPNMG GRGIRGSTST  240
RAVRRRTRST TASADAEGEG DGEGGRNFWS VEHMVALIRV KRDQDAQLQA SGHNFARMRT  300
REWKWMDVPE RLLKVGVDRP ANKCGKKWDN LMQQFKKVHA FMSMSGKEDF FQLTSQQRAK  360
KGFNFNMDRA VFEEIKGARE RSHTISPTNV ADTGGAGGVQ LPSAQSATPE SVGDGEAAGD  420
GNDEDDSSAW GGSQTSGGPT GFGKRKNVQQ QTFEALPECM DKHGALLAST MESASKRQCE  480
TMESASKRQC SIQIRQCEAI EAEVEI

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G35640.1	3e-07	Trihelix family protein