PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID GBG89429.1
Organism
Chara braunii
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Charophyceae; Charales; Characeae; Chara
Family C3H
Protein Properties Length: 219aa    MW: 24858.8 Da    PI: 6.7555
Description C3H family protein
Gene Model
Gene Model ID Type Source Coding Sequence
GBG89429.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-CCCH38.91.4e-126489126
                --S---SGGGGTS--TTTTT-SS-SS CS
     zf-CCCH  1 yktelCrffartGtCkyGdrCkFaHg 26
                y   +C+++ +tG+C yGd+CkF+H+
  GBG89429.1 64 YQPDICKDYKETGYCGYGDSCKFMHD 89
                67789********************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 219 aa     Download sequence    
MNEVVVGVRS VDLSSRGHSC VEVEAARLEV GFRREHSIAS EKAGGAHGPL RASANVRMSV  60
RFDYQPDICK DYKETGYCGY GDSCKFMHDR GDYKSGWQLD REWNEKEKQR RELAARDQLD  120
DEDDPQKEEM DEDDDLPFAC FICRRPFIDP VVTKCKHYFC ALCALKHNST SKNCAVCEKP  180
TGGVFNTARE IVRKMQEEKE KASGTLDGGK RSRGSWRSS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G01350.18e-84C3H family protein