PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

GBG89485.1

Organism

Chara braunii

Taxonomic ID

69332

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Charophyceae; Charales; Characeae; Chara

Family

Trihelix

Protein Properties

Length: 1037aa MW: 112482 Da PI: 5.923

Description

Trihelix family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
GBG89485.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	trihelix	30.7	8.4e-10	310	382	2	68
trihelix 2 WtkqevlaLiearremeerlr......rgklkkplWeevskkmrergferspkqCkekwenlnkrykkikege 68 W+ +e +L++ +re e +l r + k+ +We+++k+m+ g + + C +kw+n+ + yk+i++ + GBG89485.1 310 WSPEEQIQLVRCKREQEMHLAglghygRMRTKEWKWEDIAKRMANAGRPKDADDCMKKWDNIFQNYKNIQRFQ 382 999*********9999888555555678***********************************998765 PP

Sequence ? help Back to Top
Protein Sequence Length: 1037 aa Download sequence
MAGMQVRAVP PVAEGGRRPP TTEPSRRYDP SMYNHLPSWE TPLPPSDEEP EGDELPTFPL 60 ASESTQLLSQ MVLAGGSASN GRGEYTTLLQ QGLGDDDDGG VDLRFGLSSG GGREASRTFI 120 IDADPSPRGV QQSGSRHTKQ STLRGGTSVC VGVRPSSAGQ QHGSSAPSAD RLTSTCPERN 180 GVAVGSLRIG GTLHSMPKST TLTQPDLRDD GTCRPAVRQT PSVENITRGV SNMRAHSDGG 240 DDDGGGDDAD GRFGEDVEAG DDDDDIPIRS LGKTGGRGRG RSRGAVRGRS VGRGGRGGVS 300 DDGGKSATYW SPEEQIQLVR CKREQEMHLA GLGHYGRMRT KEWKWEDIAK RMANAGRPKD 360 ADDCMKKWDN IFQNYKNIQR FQNASGRPDF FRLSNEERKE HNFKFRMERA LYNEIHIGMV 420 GNHTIFPPNI ADTGSPDGVH LLRRGAGAGE SVGSEGAGEG LPEERSTTRD SDSNAASGAG 480 GGKRKNARQQ ALESIADVMD RHGELMSSTI ESSSKRQIHE ARDVVVDDSQ EQGRGRRQAP 540 KAKRVRTEDA LPRVRGRGAQ GWAGEVEGDC DDEFTAEEEQ AEATTSEVRE SDRQRSSDRT 600 ASKRMQTPPH EAQQLRGRGT WTEKAPVVDL GGDDDEPLER RRIRIRTTAT PPPEVVVRVA 660 TNDRPVSGRL PATPSQPRQR NDAGDGGSVQ RVGGGKVVAD ARAVGAQVAG VVGAVGSGNV 720 GAVATGREDA AVVATTREEA RGERKVEREA GEAGLTPDVP RSVVQPKAST GVARIVDQSQ 780 LQQAISRAAA VENVALRILH GWVLKSENRP RGYHVAFQYS LESFATDIAR AMWYDEEWCE 840 VVSPAICAHT IDLSMDLPLW FAGVNIEDRP EDDDMAAHQE STIIRVTYAF RAAVQMGALI 900 DSEFILHDRL SRVADCFRLL LEACMWIMRM AGDNPRSHYE AFYFADLVAK PTLVAAMHRS 960 FDHRRSVVRG AKVVTDRLGK ATATFGQYPN YIPQWAPCGI AFRHDATITG PEDAKKLDWL 1020 GSGPPDDDNN DDGKDDA

Sequence ? help Back to Top

Protein Sequence Length: 1037 aa Download sequence

MAGMQVRAVP PVAEGGRRPP TTEPSRRYDP SMYNHLPSWE TPLPPSDEEP EGDELPTFPL  60
ASESTQLLSQ MVLAGGSASN GRGEYTTLLQ QGLGDDDDGG VDLRFGLSSG GGREASRTFI  120
IDADPSPRGV QQSGSRHTKQ STLRGGTSVC VGVRPSSAGQ QHGSSAPSAD RLTSTCPERN  180
GVAVGSLRIG GTLHSMPKST TLTQPDLRDD GTCRPAVRQT PSVENITRGV SNMRAHSDGG  240
DDDGGGDDAD GRFGEDVEAG DDDDDIPIRS LGKTGGRGRG RSRGAVRGRS VGRGGRGGVS  300
DDGGKSATYW SPEEQIQLVR CKREQEMHLA GLGHYGRMRT KEWKWEDIAK RMANAGRPKD  360
ADDCMKKWDN IFQNYKNIQR FQNASGRPDF FRLSNEERKE HNFKFRMERA LYNEIHIGMV  420
GNHTIFPPNI ADTGSPDGVH LLRRGAGAGE SVGSEGAGEG LPEERSTTRD SDSNAASGAG  480
GGKRKNARQQ ALESIADVMD RHGELMSSTI ESSSKRQIHE ARDVVVDDSQ EQGRGRRQAP  540
KAKRVRTEDA LPRVRGRGAQ GWAGEVEGDC DDEFTAEEEQ AEATTSEVRE SDRQRSSDRT  600
ASKRMQTPPH EAQQLRGRGT WTEKAPVVDL GGDDDEPLER RRIRIRTTAT PPPEVVVRVA  660
TNDRPVSGRL PATPSQPRQR NDAGDGGSVQ RVGGGKVVAD ARAVGAQVAG VVGAVGSGNV  720
GAVATGREDA AVVATTREEA RGERKVEREA GEAGLTPDVP RSVVQPKAST GVARIVDQSQ  780
LQQAISRAAA VENVALRILH GWVLKSENRP RGYHVAFQYS LESFATDIAR AMWYDEEWCE  840
VVSPAICAHT IDLSMDLPLW FAGVNIEDRP EDDDMAAHQE STIIRVTYAF RAAVQMGALI  900
DSEFILHDRL SRVADCFRLL LEACMWIMRM AGDNPRSHYE AFYFADLVAK PTLVAAMHRS  960
FDHRRSVVRG AKVVTDRLGK ATATFGQYPN YIPQWAPCGI AFRHDATITG PEDAKKLDWL  1020
GSGPPDDDNN DDGKDDA