PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

GBG89691.1

Organism

Chara braunii

Taxonomic ID

69332

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Charophyceae; Charales; Characeae; Chara

Family

Trihelix

Protein Properties

Length: 961aa MW: 105120 Da PI: 7.4756

Description

Trihelix family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
GBG89691.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	trihelix	27.5	8.5e-09	137	210	2	68
trihelix 2 WtkqevlaLiearr.......emeerlrrgklkkplWeevskkmrergferspkqCkekwenlnkrykkikege 68 W+ + aL++a+r ++++++ r k ++ +We+v ++++ g++r + C +kw+nl ++ kk+ + + GBG89691.1 137 WSAGDTVALVRAKRdqdlyiaDLGTSFARMKTAAWKWEDVRMRLQAMGVTRDVVDCGKKWDNLMQQLKKVHKFQ 210 99999*******99999999999999***************************************98765 PP

Sequence ? help Back to Top
Protein Sequence Length: 961 aa Download sequence
MRLSPAARSG PDATRGRQPA KDLIGGLADM QRDGRQVWAE CRQELHRGET ETITRGVQRL 60 HVDEVEDAAV EEGQGCDDVD GEDGCESDDL PDIRPLGRRA TRGGSGGKKG PTTKPRRTKN 120 MDDDTGRSDG EGGRNFWSAG DTVALVRAKR DQDLYIADLG TSFARMKTAA WKWEDVRMRL 180 QAMGVTRDVV DCGKKWDNLM QQLKKVHKFQ NLSGGKDYLR LASRDKRSEG FSFVMDRSVY 240 GEMEAMTKGD HTIHPANLAD TGAAGGVQMP TGAGGGGGTM GGDGGGETAD EEQGSTKDSS 300 FSVGSGGGYG KRKNMRQQTF EAVADVMEKH GALMASTMDS ANKRQCSMMS RQCEILESEV 360 ECSGGNSHRP LVLYGRAPVQ AWKGLYARRG RWASQKLKGV RVQEVCIKLC LRHIQYRRSV 420 HTVTSNEIRA GRHLPSVLDA PRSHRMVAPV FALHEWDFYT VVVDRARRSS RKHKDVHVEQ 480 TVLIVADKST SFGGVGRGKK RENVPADTQG REVGRRHVPK SKRLRSEEAS PSVAVRRGRY 540 WAASNEDEDD DVFTTEEEAA HDTVTAPRGS NLQAKSDQAT SRRLLTPPPE GQQGRGQSTT 600 KAKEVVVDVG DEDNAPLESR RQRNVMQGAT ATGVRIRSAH EERSPQGAMP STLSHPRALN 660 TAPNGGSTKR GGGEVAQQEP RVASAGAIAG AGAGSSGNVV AMAGAREEVP VVEREVARGE 720 NKGEREDDDP LLSRERRGGL ARDLADRALM WVDDKAFRTT GEGRRLYDIV HRTREHFEAI 780 ASGVQAPVVS RSVVMPKSAT TLQRIADPAQ LQQTIICRGV AENIVLRVLH GWVLKSGKRP 840 RGYNLTFQYA LESVAMDFAR VMWYDEEWSN VVSAAVCAHT IDLNMDLPLW FAGMNINDRP 900 QDDNMAAYQE STVMCVPDWA SCGITFGHDA SITSPEDAKT RDWLGRGPLE EDGDDNGEND 960 A

Sequence ? help Back to Top

Protein Sequence Length: 961 aa Download sequence

MRLSPAARSG PDATRGRQPA KDLIGGLADM QRDGRQVWAE CRQELHRGET ETITRGVQRL  60
HVDEVEDAAV EEGQGCDDVD GEDGCESDDL PDIRPLGRRA TRGGSGGKKG PTTKPRRTKN  120
MDDDTGRSDG EGGRNFWSAG DTVALVRAKR DQDLYIADLG TSFARMKTAA WKWEDVRMRL  180
QAMGVTRDVV DCGKKWDNLM QQLKKVHKFQ NLSGGKDYLR LASRDKRSEG FSFVMDRSVY  240
GEMEAMTKGD HTIHPANLAD TGAAGGVQMP TGAGGGGGTM GGDGGGETAD EEQGSTKDSS  300
FSVGSGGGYG KRKNMRQQTF EAVADVMEKH GALMASTMDS ANKRQCSMMS RQCEILESEV  360
ECSGGNSHRP LVLYGRAPVQ AWKGLYARRG RWASQKLKGV RVQEVCIKLC LRHIQYRRSV  420
HTVTSNEIRA GRHLPSVLDA PRSHRMVAPV FALHEWDFYT VVVDRARRSS RKHKDVHVEQ  480
TVLIVADKST SFGGVGRGKK RENVPADTQG REVGRRHVPK SKRLRSEEAS PSVAVRRGRY  540
WAASNEDEDD DVFTTEEEAA HDTVTAPRGS NLQAKSDQAT SRRLLTPPPE GQQGRGQSTT  600
KAKEVVVDVG DEDNAPLESR RQRNVMQGAT ATGVRIRSAH EERSPQGAMP STLSHPRALN  660
TAPNGGSTKR GGGEVAQQEP RVASAGAIAG AGAGSSGNVV AMAGAREEVP VVEREVARGE  720
NKGEREDDDP LLSRERRGGL ARDLADRALM WVDDKAFRTT GEGRRLYDIV HRTREHFEAI  780
ASGVQAPVVS RSVVMPKSAT TLQRIADPAQ LQQTIICRGV AENIVLRVLH GWVLKSGKRP  840
RGYNLTFQYA LESVAMDFAR VMWYDEEWSN VVSAAVCAHT IDLNMDLPLW FAGMNINDRP  900
QDDNMAAYQE STVMCVPDWA SCGITFGHDA SITSPEDAKT RDWLGRGPLE EDGDDNGEND  960
A