PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID GBG89860.1
Organism
Chara braunii
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Charophyceae; Charales; Characeae; Chara
Family Trihelix
Protein Properties Length: 180aa    MW: 21103.6 Da    PI: 8.4245
Description Trihelix family protein
Gene Model
Gene Model ID Type Source Coding Sequence
GBG89860.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1trihelix27.39.6e-092599270
    trihelix  2 WtkqevlaLiearremeerlrrgk......lkkplWeevskkmrergferspkqCkekwenlnkrykkikegekk 70
                W+ +e laL +  re++  + +++      ++  + ++ +++m+e+g++r ++ +++kw +l+++y++ik+  ++
  GBG89860.1 25 WSLEEQLALARYMREDDAMMVAAQprqkrqRRSMRNDWGARRMKEEGYHRLAEDVRKKWVDLQNKYREIKDKYGG 99
                8888999999888877777765433333335555666679******************************98776 PP
Sequence ? help Back to Top
Protein Sequence    Length: 180 aa     Download sequence    
MSRFPVGDGY AEDDTEGGKQ KKQPWSLEEQ LALARYMRED DAMMVAAQPR QKRQRRSMRN  60
DWGARRMKEE GYHRLAEDVR KKWVDLQNKY REIKDKYGGS GKPTFWDMPQ EDKKREGLTF  120
LFEEELWDEM VWVQAKRSTM CDNTMESSTL PGRDSGGFGQ GNLRQHPSGR FGKQQEVSPD