PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

GBG89991.1

Organism

Chara braunii

Taxonomic ID

69332

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Charophyceae; Charales; Characeae; Chara

Family

Trihelix

Protein Properties

Length: 744aa MW: 82180.8 Da PI: 8.0499

Description

Trihelix family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
GBG89991.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	trihelix	28.6	3.8e-09	4	46	27	69
trihelix 27 kkplWeevskkmrergferspkqCkekwenlnkrykkikegek 69 ++ +W +v+++++ g+ r++++C +kw+nl +++kk+ + ++ GBG89991.1 4 REWKWNDVARRLKNVGVDRKAEKCGKKWDNLMQQFKKVHRFQQ 46 5679*********************************987655 PP

Sequence ? help Back to Top
Protein Sequence Length: 744 aa Download sequence
MKPREWKWND VARRLKNVGV DRKAEKCGKK WDNLMQQFKK VHRFQQSSGG VDFFLLSSKE 60 RASNDFNFNM DRAVYDEIKG STGFNETINP KNVADTGARG RVRLPSPSNG DPEAVAGDDE 120 GAGGKEEEEG STRDSSQMSP SPGGFGKRKS VRQQTFEAMT DCLDKHGALM AATMESASKR 180 QCSIQLRQCE ALEAEVQVQK EHYAASDEVS KLMCHALMEI AKAIRERVAR GRAAGKQVAR 240 AELAPKKGRH DPLKRRRTVQ GGKAALRREV ESAWVDAEET QVEDDDFEEE GEQILERRVK 300 QRMTGAARME AGGGVAAEAG HDQQRTPSIG RTEQPVGVAS SSQAVIDSST KRSPAPQARG 360 EATKVALSMA EAMKAGDGGT VGEDDEALVN RLRGQRAEAK AMEVAARLWT DDIRFWNQTW 420 GHEIIQIIHE ALVYLVDVAT GVQPSPIRRS INLLHSSIPV KKIEDGSELT AAKERALKVE 480 TIAKRAIQGW IFKSESSDKG YHLVYQYASS HAATNIARAM CAAEDWRSLV SSMVFRTTLE 540 LGMKLLLWFV GAKVEDRHQD DECEAYQEAI AQRLVRDFSN VVEAAQAMDS GRVSHKRLKS 600 LAEAMRYLLA AAAWIMRMAG DDARSHFDAW VFVQLTAKTT LLASMDRHFD SRRHVLLAAT 660 VMTEKLGRPP PTFAPPPLYI PDWASKCGIT FNHDATLSSP MEATETDWIA TGPMRGKSQT 720 TTMFMALRVG DNGSPSRWTA GEGG

Sequence ? help Back to Top

Protein Sequence Length: 744 aa Download sequence

MKPREWKWND VARRLKNVGV DRKAEKCGKK WDNLMQQFKK VHRFQQSSGG VDFFLLSSKE  60
RASNDFNFNM DRAVYDEIKG STGFNETINP KNVADTGARG RVRLPSPSNG DPEAVAGDDE  120
GAGGKEEEEG STRDSSQMSP SPGGFGKRKS VRQQTFEAMT DCLDKHGALM AATMESASKR  180
QCSIQLRQCE ALEAEVQVQK EHYAASDEVS KLMCHALMEI AKAIRERVAR GRAAGKQVAR  240
AELAPKKGRH DPLKRRRTVQ GGKAALRREV ESAWVDAEET QVEDDDFEEE GEQILERRVK  300
QRMTGAARME AGGGVAAEAG HDQQRTPSIG RTEQPVGVAS SSQAVIDSST KRSPAPQARG  360
EATKVALSMA EAMKAGDGGT VGEDDEALVN RLRGQRAEAK AMEVAARLWT DDIRFWNQTW  420
GHEIIQIIHE ALVYLVDVAT GVQPSPIRRS INLLHSSIPV KKIEDGSELT AAKERALKVE  480
TIAKRAIQGW IFKSESSDKG YHLVYQYASS HAATNIARAM CAAEDWRSLV SSMVFRTTLE  540
LGMKLLLWFV GAKVEDRHQD DECEAYQEAI AQRLVRDFSN VVEAAQAMDS GRVSHKRLKS  600
LAEAMRYLLA AAAWIMRMAG DDARSHFDAW VFVQLTAKTT LLASMDRHFD SRRHVLLAAT  660
VMTEKLGRPP PTFAPPPLYI PDWASKCGIT FNHDATLSSP MEATETDWIA TGPMRGKSQT  720
TTMFMALRVG DNGSPSRWTA GEGG