PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID GBG90468.1
Organism
Chara braunii
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Charophyceae; Charales; Characeae; Chara
Family Trihelix
Protein Properties Length: 336aa    MW: 36902.9 Da    PI: 7.3127
Description Trihelix family protein
Gene Model
Gene Model ID Type Source Coding Sequence
GBG90468.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1trihelix29.32.2e-0979165286
    trihelix   2 WtkqevlaLiearr.......emeerlrrgklkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqle 86 
                 W+ +  ++L++ +r       ++ ++++r k k+++We+ sk+m+     +    C +kw+n  + ykki++ ++      s +  +f+q++
  GBG90468.1  79 WSAEDQMLLVRCKReqdmhlaSLSHNYGRMKTKEGKWEDMSKQMANARTPKDTDDCMKKWDNQFQNYKKIQRFQNA-----SGRPDFFRQMN 165
                 9999999999999945444445555555779***************************************999887.....33457888886 PP
Sequence ? help Back to Top
Protein Sequence    Length: 336 aa     Download sequence    
MRAHSDGGED HVGFGDDADE GMREDVEAGD DDDDVPIRPL GKTTGRGKGR GRGGVHGRSV  60
GRGGRGGVSH DAGKSPTYWS AEDQMLLVRC KREQDMHLAS LSHNYGRMKT KEGKWEDMSK  120
QMANARTPKD TDDCMKKWDN QFQNYKKIQR FQNASGRPDF FRQMNEEKKE HNFKFRMDTA  180
LYNEIHAGMV GNHTIFPPNV ADTGSPDGVQ LPMRGAGGGE SVCSKAAGEG CLDERSSARE  240
SDSNVGSGAG GGKRKNARQQ SFESVSDVME RHGALMSLTI ESSSKRQCSI FTRQCDILKQ  300
EVAVQKAHYA ASDETQRMMC QALLETVAAI RGQSAM