PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID GBG90747.1
Organism
Chara braunii
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Charophyceae; Charales; Characeae; Chara
Family Trihelix
Protein Properties Length: 434aa    MW: 47006.5 Da    PI: 8.9162
Description Trihelix family protein
Gene Model
Gene Model ID Type Source Coding Sequence
GBG90747.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1trihelix27.48.9e-09365434264
    trihelix   2 WtkqevlaLiearremeerlr.......rgklkkplWeevskkmrergferspkqCkekwenlnkrykki 64 
                 W+ +e  +L++ +re e +l        r + k+ +We+++k+m   g  +    C +kw+n+ + ykki
  GBG90747.1 365 WSPEEQIQLVRCKREQEMHLTglghnygRMRTKEWKWEDIAKRMTNAGRPKDVDDCMKKWDNIFQNYKKI 434
                 9999999999999966655553333332778*************************************96 PP
Sequence ? help Back to Top
Protein Sequence    Length: 434 aa     Download sequence    
MADMQRRLTL LLLVVIVFLF VVFLHVCLSC RPWKQRRKRR ASTKGGVQVR AVPPMAGMQV  60
CAVPPAAEGG RRPPTTEPSR RYDFSMYIHL PSWETPLPPS DEEPEGDELP TFPLGSGSTQ  120
LLSQTVLAGG SASNGRGEYT TLLQQGLGDD DDGGVDLRFG LSSGGGREAS RTFIIGVDPS  180
PRGVQQSRSR HTEQSTLRGG ASVCGGVRPS SEGRQHGSSA PSTDRLTSTC PERNGVAVGS  240
LRIDGTLHSM PKSTTPTQPD LRADGTCRPA VRRTPSVENI TRGVSNMRAH NDGGDDDGGG  300
GDDADGRFGE DVEVGDDDND IPIRPLGKTG GRGRGRNSGA VRGRSVGRGG RGGVNDDGGK  360
SATYWSPEEQ IQLVRCKREQ EMHLTGLGHN YGRMRTKEWK WEDIAKRMTN AGRPKDVDDC  420
MKKWDNIFQN YKKI