PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

GBG91200.1

Organism

Chara braunii

Taxonomic ID

69332

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Charophyceae; Charales; Characeae; Chara

Family

Trihelix

Protein Properties

Length: 763aa MW: 82475.3 Da PI: 5.9345

Description

Trihelix family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
GBG91200.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	trihelix	30.8	7.5e-10	297	371	2	69
trihelix 2 WtkqevlaLiearr.......emeerlrrgklkkplWeevskkmrergferspkqCkekwenlnkrykkikegek 69 W+ aL++a+r +++++ r k+++ +We+v ++++ g++r ++ C +kw+nl +++kk+ + ++ GBG91200.1 297 WSVGDMVALVRAKRdqdmyiaGLGTSFARMKAAAWKWEDVRVRLQAMGVTRDAVDCGKKWDNLMQQFKKVHKFQN 371 6666677888888866666656677888999**************************************988665 PP

Sequence ? help Back to Top
Protein Sequence Length: 763 aa Download sequence
MAGRLSNGRP AGPSGGSINR QRSAGSVAKQ PYDLRLYAHL PSHEIPLPPS DDEGGEARSP 60 TLPLGSGSTQ DWAATQSCGG KGVETPWSYT SLLNEGLCDD DGDAAVDLSF HQSSSSGAAA 120 THTRIINPHL GGDCADNTPS VGGGDRNNSS PSVGGGIGAR KQPNWMRLSP AARSGPGGTR 180 GRQPAEDLIG GVPDVQRDGR QVWAECRQEL HRGETETITR GVQRLHVDEV EDTAIDEGQG 240 CDNVDDEDGC KSDDLPDIRP LGRRATRGGS GAKKGPAMKP RRTKNMDDDG EGGQNFWSVG 300 DMVALVRAKR DQDMYIAGLG TSFARMKAAA WKWEDVRVRL QAMGVTRDAV DCGKKWDNLM 360 QQFKKVHKFQ NLSGGKDYSR LASRERRSEG FSFVMDRSKR ENVPADTQGR AVGRRHVPKS 420 KRLRSEEPSP SVPVLRGRYW AASNEDEDDD VFMTEEEAAD DTVAAPRGST LQAKNDQAAA 480 RRLLMPPPEG QQGRGQRNTK AKKVVVDVSD EDNEPLESRR QRNAMQGATA TGVSICATHE 540 ERPPQGAMPS TPSQPRPRNS AADGGSSERG GGEVAQQEAR VASAGAGAGS SGNVAVVAGA 600 REEVPVVERE VARGENKGNR PRGYNLAFQY ALESVVTDLA RVMWYGEEWS NVVSVTVCAH 660 TIDLNMDLPL WFAGVNINDR PEEDDMAAYQ ESTVLCVAHA FRAAVQMGAN VDGGFISHDR 720 LSRIADCFRL LLAACMWLMR MAEDDHCSHY EAFYFAQLVA SPR

Sequence ? help Back to Top

Protein Sequence Length: 763 aa Download sequence

MAGRLSNGRP AGPSGGSINR QRSAGSVAKQ PYDLRLYAHL PSHEIPLPPS DDEGGEARSP  60
TLPLGSGSTQ DWAATQSCGG KGVETPWSYT SLLNEGLCDD DGDAAVDLSF HQSSSSGAAA  120
THTRIINPHL GGDCADNTPS VGGGDRNNSS PSVGGGIGAR KQPNWMRLSP AARSGPGGTR  180
GRQPAEDLIG GVPDVQRDGR QVWAECRQEL HRGETETITR GVQRLHVDEV EDTAIDEGQG  240
CDNVDDEDGC KSDDLPDIRP LGRRATRGGS GAKKGPAMKP RRTKNMDDDG EGGQNFWSVG  300
DMVALVRAKR DQDMYIAGLG TSFARMKAAA WKWEDVRVRL QAMGVTRDAV DCGKKWDNLM  360
QQFKKVHKFQ NLSGGKDYSR LASRERRSEG FSFVMDRSKR ENVPADTQGR AVGRRHVPKS  420
KRLRSEEPSP SVPVLRGRYW AASNEDEDDD VFMTEEEAAD DTVAAPRGST LQAKNDQAAA  480
RRLLMPPPEG QQGRGQRNTK AKKVVVDVSD EDNEPLESRR QRNAMQGATA TGVSICATHE  540
ERPPQGAMPS TPSQPRPRNS AADGGSSERG GGEVAQQEAR VASAGAGAGS SGNVAVVAGA  600
REEVPVVERE VARGENKGNR PRGYNLAFQY ALESVVTDLA RVMWYGEEWS NVVSVTVCAH  660
TIDLNMDLPL WFAGVNINDR PEEDDMAAYQ ESTVLCVAHA FRAAVQMGAN VDGGFISHDR  720
LSRIADCFRL LLAACMWLMR MAEDDHCSHY EAFYFAQLVA SPR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G35640.1	8e-06	Trihelix family protein