PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

GBG91307.1

Organism

Chara braunii

Taxonomic ID

69332

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Charophyceae; Charales; Characeae; Chara

Family

Trihelix

Protein Properties

Length: 656aa MW: 72240.9 Da PI: 10.2771

Description

Trihelix family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
GBG91307.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	trihelix	25.9	2.6e-08	9	59	20	70
trihelix 20 rlrrgklkkplWeevskkmrergferspkqCkekwenlnkrykkikegekk 70 +++r + k+ +W++++k+m+ g + C +kw+nl + ykki++ +++ GBG91307.1 9 NYGRMRTKEWKWDDIAKRMANAGRPKDVDDCMKKWDNLFQNYKKIQRFQNE 59 567888999***********************************9986665 PP

Sequence ? help Back to Top
Protein Sequence Length: 656 aa Download sequence
MHLAGPGHNY GRMRTKEWKW DDIAKRMANA GRPKDVDDCM KKWDNLFQNY KKIQRFQNES 60 GRPDFFGLSN EERKEHNFKF RMERALYNQI HAGMLGNHTI FPPNIADTGR SDGVQLPRRG 120 AGAGESVGSE AAGEGFPEER SSTRDSDNNV ASGAGGGKRK NARQQALESI ADVMDRHGEL 180 MSTTIESSSK RQCSIFTRQC DILEQEVAVQ KAHYAASDEK QRMMCHALME IAAAIRGRST 240 SRAHGRSPRS MSTRGNTRGK KRDVVPDDNQ GHGRGRRHAP KAKRVLSEDA SARVPRRGAQ 300 GWAATTKGDY DEEFTTEEEQ AEATRSAVRE SGRHRSFNHS ASKRMLSPPP EAQQLCARET 360 RTEKAAVVDL GGEDGEPLDR RRMRTRTTAT PPLAVMARAA VNERPVSGRL PATPSQPRQR 420 NEGGDGVSVQ RGGGGRTPSG TAHRPHAVGA EVASAAGAGG LGTVAPVAMA REEAAVVATT 480 RKEARGEKKG DREGGEPGSS RVRRGVMTKN LIDRAVLWVD DKAFWMTGEG RRLYNIVHDT 540 REYFVTIASG LPPPAVPRSV VLPKSNTHVG RIVDQSQLQQ TISRAVAVEN VALRISHGWV 600 FKSGNRPRGY HVAFQYSLES FATDIARAMW YDEEWCDVVR PAVCAHTIDM SMDLPL

Sequence ? help Back to Top

Protein Sequence Length: 656 aa Download sequence

MHLAGPGHNY GRMRTKEWKW DDIAKRMANA GRPKDVDDCM KKWDNLFQNY KKIQRFQNES  60
GRPDFFGLSN EERKEHNFKF RMERALYNQI HAGMLGNHTI FPPNIADTGR SDGVQLPRRG  120
AGAGESVGSE AAGEGFPEER SSTRDSDNNV ASGAGGGKRK NARQQALESI ADVMDRHGEL  180
MSTTIESSSK RQCSIFTRQC DILEQEVAVQ KAHYAASDEK QRMMCHALME IAAAIRGRST  240
SRAHGRSPRS MSTRGNTRGK KRDVVPDDNQ GHGRGRRHAP KAKRVLSEDA SARVPRRGAQ  300
GWAATTKGDY DEEFTTEEEQ AEATRSAVRE SGRHRSFNHS ASKRMLSPPP EAQQLCARET  360
RTEKAAVVDL GGEDGEPLDR RRMRTRTTAT PPLAVMARAA VNERPVSGRL PATPSQPRQR  420
NEGGDGVSVQ RGGGGRTPSG TAHRPHAVGA EVASAAGAGG LGTVAPVAMA REEAAVVATT  480
RKEARGEKKG DREGGEPGSS RVRRGVMTKN LIDRAVLWVD DKAFWMTGEG RRLYNIVHDT  540
REYFVTIASG LPPPAVPRSV VLPKSNTHVG RIVDQSQLQQ TISRAVAVEN VALRISHGWV  600
FKSGNRPRGY HVAFQYSLES FATDIARAMW YDEEWCDVVR PAVCAHTIDM SMDLPL