PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

GBG91479.1

Organism

Chara braunii

Taxonomic ID

69332

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Charophyceae; Charales; Characeae; Chara

Family

Trihelix

Protein Properties

Length: 738aa MW: 79406.2 Da PI: 7.2218

Description

Trihelix family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
GBG91479.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	trihelix	29.7	1.7e-09	283	354	5	67
trihelix 5 qevlaLiearremeerlr.........rgklkkplWeevskkmrergferspkqCkekwenlnkrykkikeg 67 +e l+L++ +re e ++ r + k +W++++k+m++ g + + C +kw+nl + ykki++ GBG91479.1 283 EEQLQLVRCKREQEPEMHlaglghnygRMRTKDWKWDDIAKRMASAGKPKDADHCMKKWDNLFQNYKKIQRF 354 56778888888777666632222222255799************************************9875 PP

Sequence ? help Back to Top
Protein Sequence Length: 738 aa Download sequence
MYAHLQSWET PLPPSDEEPE TEELPTLPLA SGSTQLWSQT IRAGGSGCNK GGGYTSLLQQ 60 GLGDDDDGGL DLRFGLCSGR SKEASRTLII DTDPSPRGVG QGGSQRTDQT TLRARASVAA 120 SAGPSAVLRR QGSTAPSADR STSNWPARNG AAAGSPRVEC ARPSMPERTT PTQSDVRDAG 180 ECRPPVRPIP TVENITRGVS NMRAHSDRDD DGGVGGDNAD ERLTEDVDAG DDNEDIPVRP 240 LGKTGGRGRA RSRGAVRGRS VGRGGGGCVS DDAGKPVTYG SPEEQLQLVR CKREQEPEMH 300 LAGLGHNYGR MRTKDWKWDD IAKRMASAGK PKDADHCMKK WDNLFQNYKK IQRFQNASGL 360 TGRLPATTAA PRRRNTAAEG GSVQRGGGGV VTAHAGAVGV EAAGAAGAVA GVSGSAPQVP 420 AAREEGAVVA MARDDVRGEK RSDREGDEAG SSRPRRGVLT NDLIDRAVLW VDDKPFWTTG 480 EGRRLYNIVH ETREYFVAIA SELPPPAIPR SVVMPKSSTL LARIADPSQL QQATSARRKW 540 RKSLSAYCTA GFSSLGTSRG VTILHSIENR PDDDDMAEYQ ESTIICVAHA FRAAVQMGAV 600 IDGEFISHGR LCRVADRFRL LLAACMWIMR ISGDDPRSHF EAFHFATLVS KPTLVASMHR 660 SFDHRRSIRL AVKAVTERQR KANATFGEHP DYLPRWADRD IVFGHDAGID GPEEAKKLDW 720 LGSGPADDDN DDDDNGNA

Sequence ? help Back to Top

Protein Sequence Length: 738 aa Download sequence

MYAHLQSWET PLPPSDEEPE TEELPTLPLA SGSTQLWSQT IRAGGSGCNK GGGYTSLLQQ  60
GLGDDDDGGL DLRFGLCSGR SKEASRTLII DTDPSPRGVG QGGSQRTDQT TLRARASVAA  120
SAGPSAVLRR QGSTAPSADR STSNWPARNG AAAGSPRVEC ARPSMPERTT PTQSDVRDAG  180
ECRPPVRPIP TVENITRGVS NMRAHSDRDD DGGVGGDNAD ERLTEDVDAG DDNEDIPVRP  240
LGKTGGRGRA RSRGAVRGRS VGRGGGGCVS DDAGKPVTYG SPEEQLQLVR CKREQEPEMH  300
LAGLGHNYGR MRTKDWKWDD IAKRMASAGK PKDADHCMKK WDNLFQNYKK IQRFQNASGL  360
TGRLPATTAA PRRRNTAAEG GSVQRGGGGV VTAHAGAVGV EAAGAAGAVA GVSGSAPQVP  420
AAREEGAVVA MARDDVRGEK RSDREGDEAG SSRPRRGVLT NDLIDRAVLW VDDKPFWTTG  480
EGRRLYNIVH ETREYFVAIA SELPPPAIPR SVVMPKSSTL LARIADPSQL QQATSARRKW  540
RKSLSAYCTA GFSSLGTSRG VTILHSIENR PDDDDMAEYQ ESTIICVAHA FRAAVQMGAV  600
IDGEFISHGR LCRVADRFRL LLAACMWIMR ISGDDPRSHF EAFHFATLVS KPTLVASMHR  660
SFDHRRSIRL AVKAVTERQR KANATFGEHP DYLPRWADRD IVFGHDAGID GPEEAKKLDW  720
LGSGPADDDN DDDDNGNA