PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

GBG91623.1

Organism

Chara braunii

Taxonomic ID

69332

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Charophyceae; Charales; Characeae; Chara

Family

Trihelix

Protein Properties

Length: 1260aa MW: 138587 Da PI: 6.735

Description

Trihelix family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
GBG91623.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	trihelix	36.5	1.3e-11	641	716	2	70
trihelix 2 WtkqevlaLiearremeerlrrg.......klkkplWeevskkmrergferspkqCkekwenlnkrykkikegekk 70 W+ +++ aLi+a+r+ + +++ k ++ +W +v +++++ g+ + + +C++kw+nl +++kk+ + ++ GBG91623.1 641 WSVDHIVALIRAKRDQDAHMQGMghayawmKPREWKWLDVVQRLKKLGVDKDADKCEKKWDNLMQQFKKVHHFNGL 716 9***********999999963233344479999*********************************988875 PP

Sequence ? help Back to Top
Protein Sequence Length: 1260 aa Download sequence
MASTSYAATA ALAPTVAPQG TAASVSSSAE TAVKSSAFFG SRSLGSSKAV SGFSLSLPKS 60 QLQSSRLVCE AEKKKPDRWK GLVEDISDDQ QDIVRGKGNV DALFQGSWGM GTQTAIMQSY 120 DYVSQGLRDL AKSNIHKGYY ISPSFMDKVV VHIAKNFMTL PNIKVPLILG IWGGKGQGKS 180 FQCELVFSLL GINPIQMSAG ELESGNAGEP AKLLRQRYRE AADIIKKGKM CCLFINDLDA 240 GAGRMGGTTQ YTVNNQMVNA TLMNIADSPT NVQLPGMYNQ DEIPRVPIIV TGNDFSTLYA 300 PLIRDGRMEK FYWAPTREDR IGVCLGIFKE DNVNLQDVET LVDTFPGQSI VSELPRHLQH 360 LLDTSDEEVD DTQSRTVPLG SESTQEWAAT ELCGSRDGAY RQSYTELLQQ GLGGDEGDGG 420 VNPSFGLCSG RSSARSRMVI VCPHPNDDGE QVTAVVRSSK SPMPVWEASG NNRDPPRQQF 480 RSPSVSRVAS ARPQWMQFPF PLSVGSTAAH RRGECGEKDA GFADIGDERD GREVWAEHRL 540 ELRPGHEESI TRGVQRLRVG EHEKEKEAPI LDADDHDDDG NDGEGGEKDE GYVSPLRQDG 600 MGGRGGETKA SASNGRRGKK AAGKGRDADG DGDAEGGRHF WSVDHIVALI RAKRDQDAHM 660 QGMGHAYAWM KPREWKWLDV VQRLKKLGVD KDADKCEKKW DNLMQQFKKV HHFNGLPGKH 720 NFFQLSAKER TSKGFNFNMD RAVCDEIVGY TGKNHTIHPK NVADSGCPRV YNTTSPSLPP 780 SSSYLSVCST SIVIFVTIIA IVNAIAAVIF VAIIAIVSAI LVTIFATRFS SASPSSPSSL 840 SSSFSPVSSA SPSCSPWTAP SLLLTLSLSP SSPSSLSSSS SSSSLWTAPR AFRLRDWTSL 900 LGIAACQGHS ISFCRLVKLA SQHETTPTWG KLVEKFYYRH IGYQSFVIRA NESPTSRYTL 960 VITYHVRDAR QGVKGTTYDR IADYIFRRES YWREHWLHVV FPQIPFAPGG ALYDFNGRNP 1020 KPLSRGGSKE KRRQDRRIRA VDVSREGEDD EALVNSVRRR DTPMVFHTTL NMDMNLSVWF 1080 IGADIEDRHE NNEMASYQEA SIQRLVAALT SVVSMAEGID GERVSYDRLK NIANAMRILL 1140 SASMWLMRMS GDDLRAHYDM WLFIQLTEKS MLVASMHESF DVRRDILQAA TVVTNKLAKP 1200 PMTLVDPLLY IPDSTSCDIT FSHDASLPSP MDANKLDWLG TGPPDEEEED KAGDEAGGKG

Sequence ? help Back to Top

Protein Sequence Length: 1260 aa Download sequence

MASTSYAATA ALAPTVAPQG TAASVSSSAE TAVKSSAFFG SRSLGSSKAV SGFSLSLPKS  60
QLQSSRLVCE AEKKKPDRWK GLVEDISDDQ QDIVRGKGNV DALFQGSWGM GTQTAIMQSY  120
DYVSQGLRDL AKSNIHKGYY ISPSFMDKVV VHIAKNFMTL PNIKVPLILG IWGGKGQGKS  180
FQCELVFSLL GINPIQMSAG ELESGNAGEP AKLLRQRYRE AADIIKKGKM CCLFINDLDA  240
GAGRMGGTTQ YTVNNQMVNA TLMNIADSPT NVQLPGMYNQ DEIPRVPIIV TGNDFSTLYA  300
PLIRDGRMEK FYWAPTREDR IGVCLGIFKE DNVNLQDVET LVDTFPGQSI VSELPRHLQH  360
LLDTSDEEVD DTQSRTVPLG SESTQEWAAT ELCGSRDGAY RQSYTELLQQ GLGGDEGDGG  420
VNPSFGLCSG RSSARSRMVI VCPHPNDDGE QVTAVVRSSK SPMPVWEASG NNRDPPRQQF  480
RSPSVSRVAS ARPQWMQFPF PLSVGSTAAH RRGECGEKDA GFADIGDERD GREVWAEHRL  540
ELRPGHEESI TRGVQRLRVG EHEKEKEAPI LDADDHDDDG NDGEGGEKDE GYVSPLRQDG  600
MGGRGGETKA SASNGRRGKK AAGKGRDADG DGDAEGGRHF WSVDHIVALI RAKRDQDAHM  660
QGMGHAYAWM KPREWKWLDV VQRLKKLGVD KDADKCEKKW DNLMQQFKKV HHFNGLPGKH  720
NFFQLSAKER TSKGFNFNMD RAVCDEIVGY TGKNHTIHPK NVADSGCPRV YNTTSPSLPP  780
SSSYLSVCST SIVIFVTIIA IVNAIAAVIF VAIIAIVSAI LVTIFATRFS SASPSSPSSL  840
SSSFSPVSSA SPSCSPWTAP SLLLTLSLSP SSPSSLSSSS SSSSLWTAPR AFRLRDWTSL  900
LGIAACQGHS ISFCRLVKLA SQHETTPTWG KLVEKFYYRH IGYQSFVIRA NESPTSRYTL  960
VITYHVRDAR QGVKGTTYDR IADYIFRRES YWREHWLHVV FPQIPFAPGG ALYDFNGRNP  1020
KPLSRGGSKE KRRQDRRIRA VDVSREGEDD EALVNSVRRR DTPMVFHTTL NMDMNLSVWF  1080
IGADIEDRHE NNEMASYQEA SIQRLVAALT SVVSMAEGID GERVSYDRLK NIANAMRILL  1140
SASMWLMRMS GDDLRAHYDM WLFIQLTEKS MLVASMHESF DVRRDILQAA TVVTNKLAKP  1200
PMTLVDPLLY IPDSTSCDIT FSHDASLPSP MDANKLDWLG TGPPDEEEED KAGDEAGGKG