PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID GBG91647.1
Organism
Chara braunii
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Charophyceae; Charales; Characeae; Chara
Family Trihelix
Protein Properties Length: 468aa    MW: 50186.1 Da    PI: 7.573
Description Trihelix family protein
Gene Model
Gene Model ID Type Source Coding Sequence
GBG91647.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1trihelix508.1e-16306382170
    trihelix   1 rWtkqevlaLiearremeerlrrgk.......lkkplWeevskkmrergferspkqCkekwenlnkrykkikegekk 70 
                 rW ++e+ +L ++r+e+++ ++++         k + W+ v+++m+e g++rsp qCk+k+++++  y+++k +e+ 
  GBG91647.1 306 RWGEEETAVLCRIRNEVKQLMGEETeaygrarIKSGCWKMVAQRMKENGVNRSPDQCKNKFNQVQYFYRRLKGHERL 382
                 8**************8888888643333334399**************************************99997 PP
Sequence ? help Back to Top
Protein Sequence    Length: 468 aa     Download sequence    
MPAEGDHEGL SCIQDWGCSG SQVPPAQGHG TFTVQAVDQQ AQWSHDAYGT RAHFSQSSAS  60
QTFAAPVGGT GPQVGLSPVP HEAVGHCSPV AGTSVHHRSY GPSGDPFSSS LQPVGGFTFG  120
VGGEDEYALR SQLRRRAMAM AGASESDLQH SPACFSRDLF SGQHRNSDSL PPDGQPVTPI  180
SPQAPTPQTR CHSSGGGDGG QRQQGGEDYI INRLIRNVEA GDLSSQDCGA GDGQRVGQPS  240
LSPFVGASPS EGDNLGASGG SPNVPTGVNA PQPIPSPPVS SSGTSTPARH ETSAGRPSPA  300
DKNSDRWGEE ETAVLCRIRN EVKQLMGEET EAYGRARIKS GCWKMVAQRM KENGVNRSPD  360
QCKNKFNQVQ YFYRRLKGHE RLSGLPSYWD MNASTRKVYN IDFIIRCSWY DAINSAEKDT  420
DSITLSDLRD PGTEHMSGGR RRKEQARKTG KQNFLQTKTG RVLQVGHR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G33240.19e-09Trihelix family protein