PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

GBG91663.1

Organism

Chara braunii

Taxonomic ID

69332

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Charophyceae; Charales; Characeae; Chara

Family

Trihelix

Protein Properties

Length: 537aa MW: 57304.1 Da PI: 5.8512

Description

Trihelix family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
GBG91663.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	trihelix	27.2	1e-08	320	386	10	69
trihelix 10 Liearr.......emeerlrrgklkkplWeevskkmrergferspkqCkekwenlnkrykkikegek 69 L++a+r +++++ r k + +We+ ++++ g++r ++ C +kw+nl +++kk+ + ++ GBG91663.1 320 LVRAKRdqdlyiaGLGTSFTRMKTTAWKWEDMRGRLQAMGVTRDAVDCGKKWDNLMQQFKKVHKFQN 386 5555554444444567788899999************************************987665 PP

Sequence ? help Back to Top
Protein Sequence Length: 537 aa Download sequence
MAGRLPNGRP TGTSGGSINR QRSAGSVAKQ PYDPRLYAHL PSHEIPLPPS DDEGGEARSP 60 TLPLGSGSTQ DWAATQSCGG RGVETPWSYT SLLNEGLCDD DGDAAVDLSF HLSSSSGAAA 120 THTRIINPHP GGDCAENMQG AVCGPRDGGL PQSVRDGGGD RNNSSPSVSG GVGARKRPDW 180 MRLSPAVRSG PGATRGRQAA EDLIGGVPDV QRDGRQVWAE CRQELHRGET ETITRGVQWL 240 HVGEVEDTAV DEGQGCDDVD DDDGCKSNDL PDIRPLGRRA TRGGSGAKKG PATKPRQTKN 300 MDDDGEGSRN FWSVGDNVAL VRAKRDQDLY IAGLGTSFTR MKTTAWKWED MRGRLQAMGV 360 TRDAVDCGKK WDNLMQQFKK VHKFQNLSGG KDYFRLASRD RRSEGFSFVM DRSVYDEMEA 420 MTKGDHTIHP ANLADTGAAG GVQMPAGAGR GGGTMGGDGG GEMADEEQGS TKDSSFSAGS 480 GGGYEKRKNM RQQTFEAVAD VMEKHGALMA STMDSASKRQ CSMMSRECKI LESEVEV

Sequence ? help Back to Top

Protein Sequence Length: 537 aa Download sequence

MAGRLPNGRP TGTSGGSINR QRSAGSVAKQ PYDPRLYAHL PSHEIPLPPS DDEGGEARSP  60
TLPLGSGSTQ DWAATQSCGG RGVETPWSYT SLLNEGLCDD DGDAAVDLSF HLSSSSGAAA  120
THTRIINPHP GGDCAENMQG AVCGPRDGGL PQSVRDGGGD RNNSSPSVSG GVGARKRPDW  180
MRLSPAVRSG PGATRGRQAA EDLIGGVPDV QRDGRQVWAE CRQELHRGET ETITRGVQWL  240
HVGEVEDTAV DEGQGCDDVD DDDGCKSNDL PDIRPLGRRA TRGGSGAKKG PATKPRQTKN  300
MDDDGEGSRN FWSVGDNVAL VRAKRDQDLY IAGLGTSFTR MKTTAWKWED MRGRLQAMGV  360
TRDAVDCGKK WDNLMQQFKK VHKFQNLSGG KDYFRLASRD RRSEGFSFVM DRSVYDEMEA  420
MTKGDHTIHP ANLADTGAAG GVQMPAGAGR GGGTMGGDGG GEMADEEQGS TKDSSFSAGS  480
GGGYEKRKNM RQQTFEAVAD VMEKHGALMA STMDSASKRQ CSMMSRECKI LESEVEV