PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID GBG91750.1
Organism
Chara braunii
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Charophyceae; Charales; Characeae; Chara
Family Trihelix
Protein Properties Length: 385aa    MW: 42593.6 Da    PI: 10.2213
Description Trihelix family protein
Gene Model
Gene Model ID Type Source Coding Sequence
GBG91750.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1trihelix29.61.8e-0921692169
    trihelix 21 lrrgklkkplWeevskkmrergferspkqCkekwenlnkrykkikegek 69
                 +r + k+ +W +++k+m+ +g  + +  C +kw+nl + ykki++ ++
  GBG91750.1 21 NSRMRTKEWKWVHIAKRMANGGSPKDADDCMKKWDNLFQNYKKIQRFQN 69
                335678999**********************************987655 PP
Sequence ? help Back to Top
Protein Sequence    Length: 385 aa     Download sequence    
MLLVRCKREQ EMHLAGLGHN NSRMRTKEWK WVHIAKRMAN GGSPKDADDC MKKWDNLFQN  60
YKKIQRFQNA SGRPDFFKLS NDERKEHNLK FRMERVLYNE IHSGMLGNHT IFPPNIADTG  120
SLDRVQLPRR GAGGGESVES EGGGDGCPEE RSSARNSDVN ACSVAGGGKR KNARQQALES  180
IADVMDRHGK LMSSMIESSS KQHAAFHRGS ATYKNGNATY SRRKFAASMS TRGSARGMKR  240
DAAATVGLSQ AKGRRHIPKS KKVRSGEASG NVPARGSEGW AAAAEMESDD DFEMEEPQAE  300
ATASTVRQSA RQRAFDQSAS KRMLSPPPEA QQARGRDARK DKAAVVMAEG DDDETLERCR  360
QRNLAQDSTA PLMTTRLPEK EVVPE
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G35640.18e-07Trihelix family protein