PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID GBG91813.1
Organism
Chara braunii
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Charophyceae; Charales; Characeae; Chara
Family Trihelix
Protein Properties Length: 450aa    MW: 48156.7 Da    PI: 5.9923
Description Trihelix family protein
Gene Model
Gene Model ID Type Source Coding Sequence
GBG91813.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1trihelix29.81.5e-09237311269
    trihelix   2 WtkqevlaLiearr.......emeerlrrgklkkplWeevskkmrergferspkqCkekwenlnkrykkikegek 69 
                 W+   + aL++a+r        +++++ r k ++ +We+v  ++++ g++r ++ C +kw+n  +++kk+ + ++
  GBG91813.1 237 WSVGDTAALVRAKRdqdlyiaGLGTSFTRMKTAAWKWEDVRVRLQAMGVTRDAVDCGKKWDNSMQQFKKVHKFQN 311
                 888999999**9998888877788999999***************************************987665 PP
Sequence ? help Back to Top
Protein Sequence    Length: 450 aa     Download sequence    
MAGRLPNGRP AGTSGGSINR QRSAGSVAXQ PYDPRLYAHL PSHEIPLPXS DDEGGEARSP  60
TLPLGSGSTQ DWAXTQSXGG RGVXTSWSYT SLLNEGLCDD DGDAAVDLSF HLSSSSGAAA  120
THTRLINPHP GGDCAENTQG AVWAECRQEL HRGETETITR GVQRLHADEV EDAAVDEGQG  180
CGDVDGEDGC KSHDLPDIRP LGRRATRGGS GAKKGPAMKP RRTKNMDDDG EGGRNFWSVG  240
DTAALVRAKR DQDLYIAGLG TSFTRMKTAA WKWEDVRVRL QAMGVTRDAV DCGKKWDNSM  300
QQFKKVHKFQ NLSGGKDYFT LASRERRSEG FSFVMDRSVY DEMEAMTKGD RTIHPTNLAD  360
TGAAGGVQMR AGATGDGGTM GADGGGETTD EEQESTKDSS FSAGSGGGYG KRKNMRQQTF  420
EVVADVMEKH GALMASTMDS ASKRQCSVRL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G35640.14e-07Trihelix family protein