PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

GBG91880.1

Organism

Chara braunii

Taxonomic ID

69332

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Charophyceae; Charales; Characeae; Chara

Family

Trihelix

Protein Properties

Length: 764aa MW: 83068 Da PI: 6.3726

Description

Trihelix family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
GBG91880.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	trihelix	31.6	4.4e-10	237	311	2	69
trihelix 2 WtkqevlaLiearremeerlr.......rgklkkplWeevskkmrergferspkqCkekwenlnkrykkikegek 69 W+ +e ++L++ +re e +l r + k+ +W++++k+m g + ++ C +kw+n+ + ykk+++ ++ GBG91880.1 237 WSPEEQMQLVRCKREQEMHLAglghnygRMRTKEWKWDDIAKHMVNAGRPKDAEDCMKKWDNIFQNYKKVQRFQN 311 9***********66666553333333778************************************987655 PP

Sequence ? help Back to Top
Protein Sequence Length: 764 aa Download sequence
MAGMQARAVL PAAEGGRKPA TTEPSQRNDP SMYNHPPSWE TPLPPSDAEP EGDELPTFPL 60 GSGSTQLLLQ TVLAGGSASN GRGEYTTLLQ QGLGDDDGGG VDLRFGLCSG SGREPSRTFI 120 IDADPSPRGV QQSGSRHTEQ STLRGDASVT GALSVENITQ GVSNMRAHNN GGDDNGGGGD 180 DADKRFGEDV EAGDDDDLGK TGGRGRGRSR GVVRGRSVGR GGRGGVSDDG VKSATYWSPE 240 EQMQLVRCKR EQEMHLAGLG HNYGRMRTKE WKWDDIAKHM VNAGRPKDAE DCMKKWDNIF 300 QNYKKVQRFQ NASGRPDFFR LSNEERKEHN FKFRMERALS PRNMSTRGNT RGKKRDVVVD 360 DNQGQGRGRW QAPKAKRLRT EDASAWVPCR GAQGWVAAVE GDYDDEFTTE EEQAEVTTFE 420 VRESGRQRSS DHTASKRMLT PPPEAQQLRG RETRTEKAPA VDLGGDDDEP LERRRIRIRT 480 IATPPSEVAV RVAANERPVS GRLPAMPCQP RQHNKGGNGG SAQRGGGGEV VADARTVGAE 540 EGGAAGAGGS GTVAAVAMAG EEAPVGVTAR EEARGERKGD REAGEPGSSR VHRSVMTKDL 600 IDRAVLWVDD KAFWTTVEGR RLYNIVHEMR EYFVAIASGL PPPTVPRSVV LPKSSTRVGR 660 IVDQSQLQQA ISCAVAVENV GLCILHGWVF KSGNRPRGYH MAFQYSLESF ATNIARAMWY 720 GEEWCDVVSP TVCAHTIDLS MDLPLWFAGA NIEDRPDDDD MAAH

Sequence ? help Back to Top

Protein Sequence Length: 764 aa Download sequence

MAGMQARAVL PAAEGGRKPA TTEPSQRNDP SMYNHPPSWE TPLPPSDAEP EGDELPTFPL  60
GSGSTQLLLQ TVLAGGSASN GRGEYTTLLQ QGLGDDDGGG VDLRFGLCSG SGREPSRTFI  120
IDADPSPRGV QQSGSRHTEQ STLRGDASVT GALSVENITQ GVSNMRAHNN GGDDNGGGGD  180
DADKRFGEDV EAGDDDDLGK TGGRGRGRSR GVVRGRSVGR GGRGGVSDDG VKSATYWSPE  240
EQMQLVRCKR EQEMHLAGLG HNYGRMRTKE WKWDDIAKHM VNAGRPKDAE DCMKKWDNIF  300
QNYKKVQRFQ NASGRPDFFR LSNEERKEHN FKFRMERALS PRNMSTRGNT RGKKRDVVVD  360
DNQGQGRGRW QAPKAKRLRT EDASAWVPCR GAQGWVAAVE GDYDDEFTTE EEQAEVTTFE  420
VRESGRQRSS DHTASKRMLT PPPEAQQLRG RETRTEKAPA VDLGGDDDEP LERRRIRIRT  480
IATPPSEVAV RVAANERPVS GRLPAMPCQP RQHNKGGNGG SAQRGGGGEV VADARTVGAE  540
EGGAAGAGGS GTVAAVAMAG EEAPVGVTAR EEARGERKGD REAGEPGSSR VHRSVMTKDL  600
IDRAVLWVDD KAFWTTVEGR RLYNIVHEMR EYFVAIASGL PPPTVPRSVV LPKSSTRVGR  660
IVDQSQLQQA ISCAVAVENV GLCILHGWVF KSGNRPRGYH MAFQYSLESF ATNIARAMWY  720
GEEWCDVVSP TVCAHTIDLS MDLPLWFAGA NIEDRPDDDD MAAH