PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

GBG92030.1

Organism

Chara braunii

Taxonomic ID

69332

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Charophyceae; Charales; Characeae; Chara

Family

Trihelix

Protein Properties

Length: 530aa MW: 58424.4 Da PI: 7.7679

Description

Trihelix family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
GBG92030.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	trihelix	36.4	1.4e-11	239	312	1	69
trihelix 1 rWtkqevlaLiearremeerlr.....rgklkkplWeevskkmrergferspkqCkekwenlnkrykkikegek 69 rW + e+ L r+e++ ++ r++lk++ W+ v ++mr++ ++r qCk+k++++ +y+++k++e+ GBG92030.1 239 RWGETETEWLCWYRNEVKALMGkeaygRARLKAGFWKYVEERMRAKAYNRADDQCKNKFNQILDYYRRLKAHES 312 677777777777777777666622222578****************************************9986 PP

Sequence ? help Back to Top
Protein Sequence Length: 530 aa Download sequence
MTRRFSMAQY TQNAGLSCIA DWRWSESQND APSAAGTGPA RSGGPVCAVE YAKVTECVTF 60 ALRSHVMTGG PALSSPVMPV RGFRIELGGD DEHTLRQRLR MRAMAMADRL TPPMDEQAVG 120 GYETSPARNA GSQHGSPGPS SVSSLNADTI PSQQSGAPTA MSLAGHGSLR VLTEPLCDGA 180 LRQQLSPHAA SSEYVLNRII RGIEAGVHPT EHMNGGCRGR GSSEGHPPRP CPGEKSTDRW 240 GETETEWLCW YRNEVKALMG KEAYGRARLK AGFWKYVEER MRAKAYNRAD DQCKNKFNQI 300 LDYYRRLKAH ESWSGLPSYC DMNQTRRKKY NVDFVLRRRW YNIIHPVEND KDSINLSNLM 360 DSGADKEHLE DGEGVNDIDG EMDGGGEDPA AGSGGSVGGS RSTGFEPTLG RRKRTASNAH 420 ESGVQAMTVA MRAHTTTLTR SDLAIAKMRC EATRDIAKQQ VEVHHELVQQ DIASRERIAN 480 IMGDKVEKGY FVLADAIRTL RPRTDSPYGD PDSNEFRSPF VLQLVWAVFI

Sequence ? help Back to Top

Protein Sequence Length: 530 aa Download sequence

MTRRFSMAQY TQNAGLSCIA DWRWSESQND APSAAGTGPA RSGGPVCAVE YAKVTECVTF  60
ALRSHVMTGG PALSSPVMPV RGFRIELGGD DEHTLRQRLR MRAMAMADRL TPPMDEQAVG  120
GYETSPARNA GSQHGSPGPS SVSSLNADTI PSQQSGAPTA MSLAGHGSLR VLTEPLCDGA  180
LRQQLSPHAA SSEYVLNRII RGIEAGVHPT EHMNGGCRGR GSSEGHPPRP CPGEKSTDRW  240
GETETEWLCW YRNEVKALMG KEAYGRARLK AGFWKYVEER MRAKAYNRAD DQCKNKFNQI  300
LDYYRRLKAH ESWSGLPSYC DMNQTRRKKY NVDFVLRRRW YNIIHPVEND KDSINLSNLM  360
DSGADKEHLE DGEGVNDIDG EMDGGGEDPA AGSGGSVGGS RSTGFEPTLG RRKRTASNAH  420
ESGVQAMTVA MRAHTTTLTR SDLAIAKMRC EATRDIAKQQ VEVHHELVQQ DIASRERIAN  480
IMGDKVEKGY FVLADAIRTL RPRTDSPYGD PDSNEFRSPF VLQLVWAVFI

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G33240.1	8e-06	Trihelix family protein