PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID GBG92735.1
Organism
Chara braunii
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Charophyceae; Charales; Characeae; Chara
Family Trihelix
Protein Properties Length: 251aa    MW: 27490.9 Da    PI: 10.2901
Description Trihelix family protein
Gene Model
Gene Model ID Type Source Coding Sequence
GBG92735.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1trihelix33.88.6e-1137111269
    trihelix   2 WtkqevlaLiearr.......emeerlrrgklkkplWeevskkmrergferspkqCkekwenlnkrykkikegek 69 
                 W+ + + aL++a+r        m+++++r k ++ +We+v +++++ g++r ++   +kw+nl +++kk+ + ++
  GBG92735.1  37 WSLKDTIALVRAKRyqdlyiaGMGTSFGRMKTREWKWEDVRARLQSMGVTRDAVDSGKKWDNLMQQFKKVHKFQN 111
                 999***********99999999***********************************************988665 PP
Sequence ? help Back to Top
Protein Sequence    Length: 251 aa     Download sequence    
MNGGATARKG PATKSRRSKK MDDDTGRSDG EGGRNFWSLK DTIALVRAKR YQDLYIAGMG  60
TSFGRMKTRE WKWEDVRARL QSMGVTRDAV DSGKKWDNLM QQFKKVHKFQ NLSGGKDYFK  120
LASKARRSEG FSFVMDRSVY DEMEAMTKGD HTIHPKNLAD TKAASGVQMP AGAGDGGDTM  180
GTEGGGEAAN EEQGSTKDST FSAGSGSGYG KRKNTRQQTF KAVAEVMDKH GALMANTMDS  240
ASKRQCLMML C
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G33550.12e-07Trihelix family protein