PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID GBG93466.1
Organism
Chara braunii
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Charophyceae; Charales; Characeae; Chara
Family Trihelix
Protein Properties Length: 405aa    MW: 44093.9 Da    PI: 5.7329
Description Trihelix family protein
Gene Model
Gene Model ID Type Source Coding Sequence
GBG93466.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1trihelix361.8e-11150224269
    trihelix   2 WtkqevlaLiearr.......emeerlrrgklkkplWeevskkmrergferspkqCkekwenlnkrykkikegek 69 
                 W+   + aL++arr        m++++ r k ++ +We+v +++++ g++r  + C +kw+nl +++kk+ + ++
  GBG93466.1 150 WSVGDTIALVRARRdqdlyiaGMGTSFARMKTREWKWEDVRARLQSMGVTRDVVDCGKKWDNLMQQFKKVHKFQN 224
                 899999********9999999999*********************************************988665 PP
Sequence ? help Back to Top
Protein Sequence    Length: 405 aa     Download sequence    
LPSHEIPLPP SDDEGGDARS STLPLGSGST QEWAATQLCG GGRVETPWTY TSRLMQALHQ  60
RGTETITRGV QRLHVDEGDE AAAEEARGCD NVDGDGDCNS DDLPDIRPLG RKATKGGATA  120
RKGPAAKSRR NKKMDDDTGR SNGEGGRNFW SVGDTIALVR ARRDQDLYIA GMGTSFARMK  180
TREWKWEDVR ARLQSMGVTR DVVDCGKKWD NLMQQFKKVH KFQNLSGGKD YFKLASKERR  240
SEGFSFVMDR SVYDEMEAMT EGDHTIHPKN LADTGAAGGV QMPAGAGAAG DTMGSEGGGD  300
AVDEEQGSTR DSTFSAGSGG GYGKRKNMRQ QTIEVVADVM DKHDALMAST MDSASKRQCS  360
MMSRQCDILE SEVEVQRKHY AAADEANKMM SEALMEIAKA IRERS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G35640.15e-09Trihelix family protein