PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kaladp0001s0097.1.p
Organism
Kalanchoe fedtschenkoi
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family M-type_MADS
Protein Properties Length: 227aa    MW: 24740.4 Da    PI: 6.289
Description M-type_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kaladp0001s0097.1.pgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF35.51.2e-111055550
                         SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE CS
               SRF-TF  5 nksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeys 50
                         ++s+++v fsk   ++ K  +EL +LCd++++ i+  ++++ y+++
  Kaladp0001s0097.1.p 10 DDSKKTVDFSKKASTLTKQIYELTTLCDVQACFILRTPHNQTYTWP 55
                         6899*****************************************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 227 aa     Download sequence    
MKQLGHQNAD DSKKTVDFSK KASTLTKQIY ELTTLCDVQA CFILRTPHNQ TYTWPESVDQ  60
VGRVVGLFKS KAGTTTGKIA RDVTPDERRL KDMPTAQAEN LLKRLEDRIE ALTAKIANAE  120
GGDDITKIGS NPDGGEIMKR FSFKEKLKEL TAGQAMTLSS ELDAKIEALT TKIDNGEGRH  180
AKSTIAGNND KGMNPAVDMD CSADNDDSWT XXXXXXXXXX GAKSVV*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G31630.11e-08M-type_MADS family protein