PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kaladp0001s0103.1.p
Organism
Kalanchoe fedtschenkoi
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family ERF
Protein Properties Length: 259aa    MW: 28367.5 Da    PI: 8.7989
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kaladp0001s0103.1.pgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP253.18.1e-1757106255
                  AP2   2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                          ++ GVr+++ +grWvAeI+d s   ++ r +lg+f+ aeeAa+a++ a++ l+g
  Kaladp0001s0103.1.p  57 RFLGVRQRP-SGRWVAEIKDTS---QKLRLWLGTFDKAEEAAAAYDSAARLLRG 106
                          678******.7*********42...35***********************9998 PP
Sequence ? help Back to Top
Protein Sequence    Length: 259 aa     Download sequence    
MDSTKAACSD YQPHSRQPAT STCHIFSASK AHPFEEAKHS SNLCKRSGIN KGLIKTRFLG  60
VRQRPSGRWV AEIKDTSQKL RLWLGTFDKA EEAAAAYDSA ARLLRGRNAK TNFPVGHGVM  120
GTQENCSLLR KNPRLYNLLQ HAVLKNQARS RSVSTWRCPS TSSNQGRYNE TETGSTVVFD  180
TLVDETFNAC GSSLSDQNND RALNINDFVF PSSCSSSSKV YSSVVVAPSF STCFNEEDRP  240
LEEKGSYSTE CGTSQGAQ*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G19790.13e-19ERF family protein