PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kaladp0001s0214.2.p
Organism
Kalanchoe fedtschenkoi
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family NF-YC
Protein Properties Length: 211aa    MW: 23552.3 Da    PI: 4.9177
Description NF-YC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kaladp0001s0214.2.pgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NF-YC25.43e-08991871199
                NF-YC  11 ekatdfknhelPlarikkilkad.edvkmisaeaPvllskacelfileltlrswlhaeenkrrtlkksdiaaavtrtdifdflvdivprd 99 
                          e++++ ++  +P+ ri+ i k++ ed  ++s ea  ll ka e f+ +l   ++ ++ + +r+ +   d  ++v++ +   fl d +p++
  Kaladp0001s0214.2.p  99 EEEEEGAKCLFPMNRIRMIAKSEgEDDMRLSHEAIFLLNKASEKFLGHLCEEAYGETVN-QRKNFVAYDHLSSVSKNQRLCFLSDLIPEK 187
                          45556667889**********983455569************************99985.667777788888999***********9975 PP
Sequence ? help Back to Top
Protein Sequence    Length: 211 aa     Download sequence    
MRNTRSTPRK GQKPTTKTKK KGHVSNGDVT EAEVASPATL SSPDSIPEPP YSDSVGSDNK  60
SVAEEEDEVE EGAEEQEVEV VKKKTVLKQN GKKRKVEEEE EEEGAKCLFP MNRIRMIAKS  120
EGEDDMRLSH EAIFLLNKAS EKFLGHLCEE AYGETVNQRK NFVAYDHLSS VSKNQRLCFL  180
SDLIPEKISV EEALKERQLA NCDPRDPTTN *
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
18294KKKTVLKQNGKKR
28395KKKTVLKQNGKKR
38795LKQNGKKRK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G07980.11e-23NF-YC family protein